############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data xcore ### ############################################################################## ############################################################################## * checking for file ‘xcore/DESCRIPTION’ ... OK * preparing ‘xcore’: * checking DESCRIPTION meta-information ... OK * installing the package (it is needed to build vignettes) * creating vignettes ... ERROR --- re-building ‘xcore_vignette.Rmd’ using rmarkdown Quitting from xcore_vignette.Rmd:120-127 [unnamed-chunk-7] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `value[[3L]]()`: ! failed to connect reason: Failed to perform HTTP request. Caused by error in `curl::curl_fetch_memory()`: ! Timeout was reached [bioconductor.org]: Connection timed out after 10003 milliseconds Consider rerunning with 'localHub=TRUE' --- Backtrace: ▆ 1. └─ExperimentHub::ExperimentHub() 2. └─AnnotationHub::.Hub(...) 3. └─base::tryCatch(...) 4. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 5. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 6. └─value[[3L]](cond) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'xcore_vignette.Rmd' failed with diagnostics: failed to connect reason: Failed to perform HTTP request. Caused by error in `curl::curl_fetch_memory()`: ! Timeout was reached [bioconductor.org]: Connection timed out after 10003 milliseconds Consider rerunning with 'localHub=TRUE' --- failed re-building ‘xcore_vignette.Rmd’ SUMMARY: processing the following file failed: ‘xcore_vignette.Rmd’ Error: Vignette re-building failed. Execution halted