############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data RepViz ### ############################################################################## ############################################################################## * checking for file ‘RepViz/DESCRIPTION’ ... OK * preparing ‘RepViz’: * checking DESCRIPTION meta-information ... OK * installing the package (it is needed to build vignettes) * creating vignettes ... ERROR --- re-building ‘RepViz.Rmd’ using rmarkdown 2025-12-21 17:21:47.562 R[25721:474504175] XType: Using static font registry. Quitting from RepViz.Rmd:80-93 [plot_plot] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `req_perform()`: ! Failed to perform HTTP request. Caused by error in `curl::curl_fetch_memory()`: ! SSL connect error [grch37.ensembl.org]: TLS connect error: error:1404B42E:SSL routines:ST_CONNECT:tlsv1 alert protocol version --- Backtrace: ▆ 1. └─RepViz::RepViz(...) 2. └─RepViz:::getBiomaRt(region, genome) 3. └─biomaRt::useMart(...) 4. └─biomaRt:::.useMart(...) 5. └─biomaRt:::.listMarts(...) 6. └─biomaRt:::bmRequest(...) 7. └─httr2::req_perform(request) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'RepViz.Rmd' failed with diagnostics: Failed to perform HTTP request. Caused by error in `curl::curl_fetch_memory()`: ! SSL connect error [grch37.ensembl.org]: TLS connect error: error:1404B42E:SSL routines:ST_CONNECT:tlsv1 alert protocol version --- failed re-building ‘RepViz.Rmd’ SUMMARY: processing the following file failed: ‘RepViz.Rmd’ Error: Vignette re-building failed. Execution halted