############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data spatialLIBD ### ############################################################################## ############################################################################## * checking for file ‘spatialLIBD/DESCRIPTION’ ... OK * preparing ‘spatialLIBD’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘TenX_data_download.Rmd’ using rmarkdown --- finished re-building ‘TenX_data_download.Rmd’ --- re-building ‘guide_to_spatial_registration.Rmd’ using rmarkdown --- finished re-building ‘guide_to_spatial_registration.Rmd’ --- re-building ‘multi_gene_plots.Rmd’ using rmarkdown Quitting from lines 340-345 (multi_gene_plots.Rmd) Error: processing vignette 'multi_gene_plots.Rmd' failed with diagnostics: subscript out of bounds --- failed re-building ‘multi_gene_plots.Rmd’ --- re-building ‘spatialLIBD.Rmd’ using rmarkdown --- finished re-building ‘spatialLIBD.Rmd’ SUMMARY: processing the following file failed: ‘multi_gene_plots.Rmd’ Error: Vignette re-building failed. Execution halted