############################################################################## ############################################################################## ### ### Running command: ### ### /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD INSTALL microRNA ### ############################################################################## ############################################################################## * installing to library ‘/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library’ * installing *source* package ‘microRNA’ ... ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’ g++ -std=gnu++17 -I"/home/rapidbuild/bbs-3.21-bioc-rapid/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -DR_NO_REMAP -c longest_common_substring.cpp -o longest_common_substring.o longest_common_substring.cpp: In function ‘SEXPREC* longest_common_substring(SEXP)’: longest_common_substring.cpp:55:15: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘__gnu_cxx::__alloc_traits, int>::value_type’ {aka ‘int’} [-Wsign-compare] 55 | if (i == len[index] - 1) { // ignore null termination character | ~~^~~~~~~~~~~~~~~~~ longest_common_substring.cpp:87:35: error: ‘mkCharLen’ was not declared in this scope; did you mean ‘Rf_mkCharLen’? 87 | SET_STRING_ELT(result, i, mkCharLen(found[i], lcs_len)); | ^~~~~~~~~ | Rf_mkCharLen make: *** [/home/rapidbuild/bbs-3.21-bioc-rapid/R/etc/Makeconf:202: longest_common_substring.o] Error 1 ERROR: compilation failed for package ‘microRNA’ * removing ‘/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/microRNA’