| Back to --- experimental! --- GPU-enabled build/check report for BioC 3.21 Report updated every 6 hours |
This page was generated on 2025-10-16 07:45 -0400 (Thu, 16 Oct 2025).
| Hostname: | kakapo1 |
| OS: | Linux (Ubuntu 24.04.3 LTS) |
| Arch: | x86_64 |
| Platform: | x86_64-linux-gnu |
| R version: | 4.5.1 (2025-06-13) -- "Great Square Root" |
| R environment variables: | Renviron.bioc |
| R variable (VAR) | Value ('R CMD config <VAR>' output) |
| CC | gcc -std=gnu2x |
| CFLAGS | -g -O2 -Wall -Werror=format-security |
| CPICFLAGS | -fpic |
| Please refer to 'R CMD config -h' for the meaning of these variables | |
Compiler version ('gcc -std=gnu2x --version' output):
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
| R variable (VAR) | Value ('R CMD config <VAR>' output) |
| CXX | g++ -std=gnu++17 |
| CXXFLAGS | -g -O2 -Wall -Werror=format-security |
| CXXPICFLAGS | -fpic |
| Please refer to 'R CMD config -h' for the meaning of these variables | |
Compiler version ('g++ -std=gnu++17 --version' output):
g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
| R variable (VAR) | Value ('R CMD config <VAR>' output) |
| CXX11 | g++ |
| CXX11FLAGS | -g -O2 -Wall -Werror=format-security |
| CXX11PICFLAGS | -fpic |
| CXX11STD | -std=gnu++11 |
| Please refer to 'R CMD config -h' for the meaning of these variables | |
Compiler version ('g++ --version' output):
g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
| R variable (VAR) | Value ('R CMD config <VAR>' output) |
| CXX14 | g++ |
| CXX14FLAGS | -g -O2 -Wall -Werror=format-security |
| CXX14PICFLAGS | -fpic |
| CXX14STD | -std=gnu++14 |
| Please refer to 'R CMD config -h' for the meaning of these variables | |
Compiler version ('g++ --version' output):
g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
| R variable (VAR) | Value ('R CMD config <VAR>' output) |
| CXX17 | g++ |
| CXX17FLAGS | -g -O2 -Wall -Werror=format-security |
| CXX17PICFLAGS | -fpic |
| CXX17STD | -std=gnu++17 |
| Please refer to 'R CMD config -h' for the meaning of these variables | |
Compiler version ('g++ --version' output):
g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
java version ('java --version' output):
openjdk 21.0.7 2025-04-15 OpenJDK Runtime Environment (build 21.0.7+6-Ubuntu-0ubuntu124.04) OpenJDK 64-Bit Server VM (build 21.0.7+6-Ubuntu-0ubuntu124.04, mixed mode, sharing)
pandoc version ('pandoc --version' output):
pandoc 3.1.3 Features: -server +lua Scripting engine: Lua 5.4 User data directory: /home/biocbuild/.local/share/pandoc Copyright (C) 2006-2023 John MacFarlane. Web: https://pandoc.org This is free software; see the source for copying conditions. There is no warranty, not even for merchantability or fitness for a particular purpose.
nvcc version ('nvcc --version' output):
nvcc: NVIDIA (R) Cuda compiler driver Copyright (c) 2005-2025 NVIDIA Corporation Built on Wed_Apr__9_19:24:57_PDT_2025 Cuda compilation tools, release 12.9, V12.9.41 Build cuda_12.9.r12.9/compiler.35813241_0
nvidia-smi version ('nvidia-smi --version' output):
Thu Oct 16 08:48:43 2025
+-----------------------------------------------------------------------------------------+
| NVIDIA-SMI 575.51.03 Driver Version: 575.51.03 CUDA Version: 12.9 |
|-----------------------------------------+------------------------+----------------------+
| GPU Name Persistence-M | Bus-Id Disp.A | Volatile Uncorr. ECC |
| Fan Temp Perf Pwr:Usage/Cap | Memory-Usage | GPU-Util Compute M. |
| | | MIG M. |
|=========================================+========================+======================|
| 0 NVIDIA L40S Off | 00000000:B5:00.0 Off | 0 |
| N/A 32C P8 33W / 350W | 0MiB / 46068MiB | 0% Default |
| | | N/A |
+-----------------------------------------+------------------------+----------------------+
+-----------------------------------------------------------------------------------------+
| Processes: |
| GPU GI CI PID Type Process name GPU Memory |
| ID ID Usage |
|=========================================================================================|
| No running processes found |
+-----------------------------------------------------------------------------------------+
More information might be added in the future...