############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r gDNAx -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data gDNAx ### ############################################################################## ############################################################################## * checking for file 'gDNAx/DESCRIPTION' ... OK * preparing 'gDNAx': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'gDNAx.Rmd' using rmarkdown [E::hts_idx_load3] Could not load local index file 'E:\biocbuild\bbs-3.21-bioc\tmpdir\RtmpozoQTI/s32gDNA0.bai' : Invalid argument [E::hts_idx_load3] Could not load local index file 'E:\biocbuild\bbs-3.21-bioc\tmpdir\RtmpozoQTI/s32gDNA0' : No such file or directory Quitting from lines 101-106 [unnamed-chunk-3] (gDNAx.Rmd) Error: processing vignette 'gDNAx.Rmd' failed with diagnostics: error in evaluating the argument 'obj' in selecting a method for function 'unname': isOpen() is not 'TRUE' --- failed re-building 'gDNAx.Rmd' SUMMARY: processing the following file failed: 'gDNAx.Rmd' Error: Vignette re-building failed. Execution halted