############################################################################## ############################################################################## ### ### Running command: ### ### /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD INSTALL flowClust ### ############################################################################## ############################################################################## * installing to library ‘/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library’ * installing *source* package ‘flowClust’ ... ** this is package ‘flowClust’ version ‘3.45.0’ ** using staged installation configure: Using bundled GSL. configure: Searching for the compilers specified by R. checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E untarring gsl... configure: Preparing to compile GSL. configure: Configuring bundled GSL. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether to enable maintainer-specific portions of Makefiles... no checking whether make sets $(MAKE)... (cached) yes checking build system type... config.guess: cannot create a temporary directory in /tmp configure: error: cannot guess build type; you must specify one cp: will not overwrite just-created 'gsl/test.h' with 'roots/test.h' cp: will not overwrite just-created 'gsl/error.h' with 'specfunc/error.h' cp: will not overwrite just-created 'gsl/view.h' with 'vector/view.h' make: *** No rule to make target 'install'. Stop. cp: cannot create directory '/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/meat/flowClust/src/gslbuild/include': No such file or directory configure: Using the following compilation and linking flags for flowClust configure: PKG_CFLAGS= -I/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/meat/flowClust/src/gslbuild/include configure: PKG_LIBS= configure: FLOWCLUST_DEFS=-DGSL_MAJOR=1 -DGSL_MINOR=13 -DGSL_STATIC configure: Compiling using GSL version: '1.13.0'. configure: Using bundled GSL: 'yes'. configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ gcc -I"/home/rapidbuild/bbs-3.21-bioc-rapid/R/include" -DNDEBUG -I/usr/local/include -I/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/meat/flowClust/src/gslbuild/include -DGSL_MAJOR=1 -DGSL_MINOR=13 -DGSL_STATIC -fpic -g -O2 -Wall -Werror=format-security -c BoxCox.c -o BoxCox.o BoxCox.c:167:1: fatal error: error writing to /tmp/ccyp6bCv.s: No space left on device 167 | } | ^ compilation terminated. make: *** [/home/rapidbuild/bbs-3.21-bioc-rapid/R/etc/Makeconf:195: BoxCox.o] Error 1 ERROR: compilation failed for package ‘flowClust’ * removing ‘/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/flowClust’ * restoring previous ‘/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/flowClust’