############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data h5vc ### ############################################################################## ############################################################################## * checking for file ‘h5vc/DESCRIPTION’ ... OK * preparing ‘h5vc’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘h5vc.simple.genome.browser.Rmd’ using rmarkdown [WARNING] This document format requires a nonempty element. Defaulting to 'h5vc.simple.genome.browser.knit' as the title. To specify a title, use 'title' in metadata or --metadata title="...". --- finished re-building ‘h5vc.simple.genome.browser.Rmd’ --- re-building ‘h5vc.tour.Rmd’ using rmarkdown Quitting from lines 234-254 [unnamed-chunk-1] (h5vc.tour.Rmd) Error: processing vignette 'h5vc.tour.Rmd' failed with diagnostics: Failed to parse URL: Bad scheme --- failed re-building ‘h5vc.tour.Rmd’ SUMMARY: processing the following file failed: ‘h5vc.tour.Rmd’ Error: Vignette re-building failed. Execution halted