############################################################################## ############################################################################## ### ### Running command: ### ### /home/hpages/bbs-3.18-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data DelayedArray ### ############################################################################## ############################################################################## * checking for file ‘DelayedArray/DESCRIPTION’ ... OK * preparing ‘DelayedArray’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘02-Implementing_a_backend.Rmd’ using rmarkdown --- finished re-building ‘02-Implementing_a_backend.Rmd’ --- re-building ‘01-Working_with_large_arrays.Rnw’ using knitr Quitting from lines 44-55 [setup] (01-Working_with_large_arrays.Rnw) Error: processing vignette '01-Working_with_large_arrays.Rnw' failed with diagnostics: there is no package called 'HDF5Array' --- failed re-building ‘01-Working_with_large_arrays.Rnw’ --- re-building ‘03-DelayedArray_HDF5Array_update.Rnw’ using knitr Quitting from lines 42-49 [setup] (03-DelayedArray_HDF5Array_update.Rnw) Error: processing vignette '03-DelayedArray_HDF5Array_update.Rnw' failed with diagnostics: there is no package called 'HDF5Array' --- failed re-building ‘03-DelayedArray_HDF5Array_update.Rnw’ SUMMARY: processing the following files failed: ‘01-Working_with_large_arrays.Rnw’ ‘03-DelayedArray_HDF5Array_update.Rnw’ Error: Vignette re-building failed. Execution halted