############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data spicyWorkflow ### ############################################################################## ############################################################################## * checking for file ‘spicyWorkflow/DESCRIPTION’ ... OK * preparing ‘spicyWorkflow’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘spicyWorkflow.Rmd’ using rmarkdown Quitting from lines 200-211 [segment] (spicyWorkflow.Rmd) Error: processing vignette 'spicyWorkflow.Rmd' failed with diagnostics: BiocParallel errors 1 remote errors, element index: 79 0 unevaluated and other errors first remote error: Error in lm.fit(x, y, offset = offset, singular.ok = singular.ok, ...): 0 (non-NA) cases --- failed re-building ‘spicyWorkflow.Rmd’ SUMMARY: processing the following file failed: ‘spicyWorkflow.Rmd’ Error: Vignette re-building failed. Execution halted