############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data MAST ### ############################################################################## ############################################################################## * checking for file ‘MAST/DESCRIPTION’ ... OK * preparing ‘MAST’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘MAITAnalysis.Rmd’ using rmarkdown Warning: code chunks must not depend on the uncached chunk "data" Warning: code chunks must not depend on the uncached chunk "zlm" Warning: code chunks must not depend on the uncached chunk "boots" --- finished re-building ‘MAITAnalysis.Rmd’ --- re-building ‘MAST-Intro.Rmd’ using rmarkdown --- finished re-building ‘MAST-Intro.Rmd’ --- re-building ‘MAST-interoperability.Rmd’ using rmarkdown Quitting from lines 134-140 (MAST-interoperability.Rmd) Error: processing vignette 'MAST-interoperability.Rmd' failed with diagnostics: 'x' must be an array of at least two dimensions --- failed re-building ‘MAST-interoperability.Rmd’ SUMMARY: processing the following file failed: ‘MAST-interoperability.Rmd’ Error: Vignette re-building failed. Execution halted