############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r corral -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data corral ### ############################################################################## ############################################################################## * checking for file 'corral/DESCRIPTION' ... OK * preparing 'corral': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'corral_dimred.Rmd' using rmarkdown Quitting from lines 97-127 (corral_dimred.Rmd) Error: processing vignette 'corral_dimred.Rmd' failed with diagnostics: 'multiplot' is defunct. Use 'scater::multiplot is defunct. Use 'gridExtra::grid.arrange' instead' instead. See help("Defunct") --- failed re-building 'corral_dimred.Rmd' --- re-building 'corralm_alignment.Rmd' using rmarkdown --- finished re-building 'corralm_alignment.Rmd' SUMMARY: processing the following file failed: 'corral_dimred.Rmd' Error: Vignette re-building failed. Execution halted