############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL OmnipathR ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library’ * installing *source* package ‘OmnipathR’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location [2023-04-10 15:18:54] [INFO] [OmnipathR] Initialized cache: `/Users/biocbuild/Library/Caches/OmnipathR`. [2023-04-10 15:18:54] [TRACE] [OmnipathR] Running on a build server, wiping cache. [2023-04-10 15:18:54] [TRACE] [OmnipathR] Cache is at `/Users/biocbuild/Library/Caches/OmnipathR`. [2023-04-10 15:18:54] [TRACE] [OmnipathR] Contains 1 files. [2023-04-10 15:18:54] [TRACE] [OmnipathR] Cache is locked: FALSE. [2023-04-10 15:18:54] [SUCCESS] [OmnipathR] Removing all cache contents from `/Users/biocbuild/Library/Caches/OmnipathR`. [2023-04-10 15:18:54] [TRACE] [OmnipathR] Pandoc version: `2.7.3`. [2023-04-10 15:18:54] [TRACE] [OmnipathR] Cache locked: FALSE ** testing if installed package can be loaded from final location [2023-04-10 15:18:56] [INFO] [OmnipathR] Initialized cache: `/Users/biocbuild/Library/Caches/OmnipathR`. [2023-04-10 15:18:56] [TRACE] [OmnipathR] Running on a build server, wiping cache. [2023-04-10 15:18:56] [TRACE] [OmnipathR] Cache is at `/Users/biocbuild/Library/Caches/OmnipathR`. [2023-04-10 15:18:56] [TRACE] [OmnipathR] Contains 1 files. [2023-04-10 15:18:56] [TRACE] [OmnipathR] Cache is locked: FALSE. [2023-04-10 15:18:56] [SUCCESS] [OmnipathR] Removing all cache contents from `/Users/biocbuild/Library/Caches/OmnipathR`. [2023-04-10 15:18:56] [TRACE] [OmnipathR] Pandoc version: `2.7.3`. [2023-04-10 15:18:56] [TRACE] [OmnipathR] Cache locked: FALSE ** testing if installed package keeps a record of temporary installation path * DONE (OmnipathR)