############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf FamAgg.buildbin-libdir && mkdir FamAgg.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh FamAgg_1.25.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R FamAgg.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=FamAgg.buildbin-libdir FamAgg_1.25.0.tar.gz' >>>>>>> * installing *source* package ‘FamAgg’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘pedigree’ in package ‘FamAgg’ in method for ‘countGenerations’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList” in method for ‘countGenerations’ with signature ‘"pedigree"’: no definition for class “pedigree” in method for ‘estimateGenerations’ with signature ‘"pedigree"’: no definition for class “pedigree” in method for ‘estimateGenerations’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList” in method for ‘findFounders’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList” in method for ‘findFounders’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList” in method for ‘generationsFrom’ with signature ‘"pedigree"’: no definition for class “pedigree” in method for ‘generationsFrom’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList” in method for ‘getAncestors’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList” in method for ‘getAncestors’ with signature ‘"pedigree"’: no definition for class “pedigree” in method for ‘getChildren’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList” in method for ‘getChildren’ with signature ‘"pedigree"’: no definition for class “pedigree” in method for ‘getCommonAncestor’ with signature ‘"pedigree"’: no definition for class “pedigree” in method for ‘getCommonAncestor’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList” in method for ‘getMissingMate’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList” in method for ‘getMissingMate’ with signature ‘"pedigree"’: no definition for class “pedigree” in method for ‘getSiblings’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList” in method for ‘getSiblings’ with signature ‘"pedigree"’: no definition for class “pedigree” in method for ‘getAll’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList” in method for ‘getAll’ with signature ‘"pedigree"’: no definition for class “pedigree” in method for ‘getExternalMatched’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList” in method for ‘getExternalMatched’ with signature ‘"pedigree"’: no definition for class “pedigree” in method for ‘getGenerationMatched’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList” in method for ‘getGenerationMatched’ with signature ‘"pedigree"’: no definition for class “pedigree” in method for ‘getGenerationSexMatched’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList” in method for ‘getGenerationSexMatched’ with signature ‘"pedigree"’: no definition for class “pedigree” in method for ‘getSexMatched’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList” in method for ‘getSexMatched’ with signature ‘"pedigree"’: no definition for class “pedigree” ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (FamAgg)