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### Running command:
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###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL rhdf5client
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'rhdf5client' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c extract.c -o extract.o
extract.c: In function 'extractBin':
extract.c:101:42: warning: 'rdp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     A[ia] = (Rf_isReal(resvec_sexp) ? rdp[ib] : rip[ib]);
                                          ^
extract.c:101:52: warning: 'rip' may be used uninitialized in this function [-Wmaybe-uninitialized]
     A[ia] = (Rf_isReal(resvec_sexp) ? rdp[ib] : rip[ib]);
                                                    ^
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o rhdf5client.dll tmp.def extract.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR
installing to D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-rhdf5client/00new/rhdf5client/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'rhdf5client'
    finding HTML links ... done
    H5S_Array-class                         html  
    H5S_Array                               html  
    H5S_ArraySeed-class                     html  
    H5S_Matrix-class                        html  
    H5S_dataset                             html  
    H5S_dataset2                            html  
    H5S_source-class                        html  
    HSDSArray                               html  
    HSDSArraySeed                           html  
    HSDSDataset-class                       html  
    HSDSDataset                             html  
    HSDSFile-class                          html  
    HSDSFile                                html  
    HSDSMatrix                              html  
    HSDSSource-class                        html  
    HSDSSource                              html  
    HSDS_Matrix                             html  
    HSDS_Matrix_OLD                         html  
    URL_h5serv                              html  
    URL_hsds                                html  
    as                                      html  
    check_hsds                              html  
    dataset                                 html  
    dim-H5S_ArraySeed-method                html  
    dim                                     html  
    dimnames-H5S_ArraySeed-method           html  
    dimnames                                html  
    domains                                 html  
    dsmeta                                  html  
    extract_array                           html  
    fetchDatasets                           html  
    getData-methods                         html  
    getDatasetAttrs                         html  
    getDatasetSlice                         html  
    getDatasetUUIDs                         html  
    getDims                                 html  
    getHRDF                                 html  
    getReq                                  html  
    groups-methods                          html  
    hsdsInfo                                html  
    internalDim                             html  
    links                                   html  
    listDatasets                            html  
    listDomains-methods                     html  
    rhdf5client-deprecated                  html  
    rhdf5client                             html  
    setPath                                 html  
    sproc                                   html  
    sub-H5S_dataset-character-character-ANY-method
                                            html  
    sub-H5S_dataset-numeric-numeric-ANY-method
                                            html  
    sub-HSDSDataset-numeric-ANY-ANY-method
                                            html  
    sub-HSDSDataset-numeric-numeric-ANY-method
                                            html  
    sub-sub                                 html  
    targets                                 html  
    transfermode                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rhdf5client)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'ncRNAtools' is missing or broken
 done