############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL TrajectoryGeometry ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'TrajectoryGeometry' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'TrajectoryGeometry' finding HTML links ... done analyseBranchPoint html analyseSingleCellTrajectory html chol_answers html chol_attributes html chol_branch_point_results html chol_pseudo_time html chol_pseudo_time_normalised html circleOnTheUnitSphere html crooked_path html crooked_path_center html crooked_path_projection html crooked_path_radius html distanceBetweenTrajectories html findSphereClusterCenter html findSphericalDistance html generateRandomPaths html generateRandomUnitVector html getDistanceDataForPaths html getSphericalData html getStepLengths html hep_answers html hep_attributes html hep_pseudo_time html hep_pseudo_time_normalised html orthonormalBasis html oscillation html pathProgression html pathToSphericalData html plotPathProjectionCenterAndCircle html projectPathToSphere html samplePath html single_cell_matrix html straight_path html straight_path_center html straight_path_projection html straight_path_radius html testPathForDirectionality html visualiseBranchPointStats html visualiseTrajectoryStats html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TrajectoryGeometry) Making 'packages.html' ... done