############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL IVAS ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'IVAS' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Note: next used in wrong context: no loop is visible ** help *** installing help indices converting help for package 'IVAS' finding HTML links ... done ASdb-class html CalSigSNP html IVAS-deprecated html IVAS-package html MsqtlFinder html RatioFromFPKM html Splicingfinder html calSignificant html chrseparate html finding level-2 HTML links ... done findAlternative html findOversnp html sQTLsFinder html sampleexp html samplesnp html samplesnplocus html saveBplot html sqtlfinder html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (IVAS) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'Motif2Site' is missing or broken done