############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r Cepo -R && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Cepo ### ############################################################################## ############################################################################## * checking for file 'Cepo/DESCRIPTION' ... OK * preparing 'Cepo': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'cepo.Rmd' using rmarkdown Error: processing vignette 'cepo.Rmd' failed with diagnostics: Duplicate chunk label 'return-p-values', which has been used for the chunk: ds_res_pvalues = Cepo(exprsMat = logcounts(cellbench), cellType = cellbench$celltype, computePvalue = 200, prefilter_pzero = 0.4) Error: tangling vignette 'cepo.Rmd' failed with diagnostics: Duplicate chunk label 'return-p-values', which has been used for the chunk: ds_res_pvalues = Cepo(exprsMat = logcounts(cellbench), cellType = cellbench$celltype, computePvalue = 200, prefilter_pzero = 0.4) --- failed re-building 'cepo.Rmd' SUMMARY: processing the following files failed: 'cepo.Rmd' 'cepo.Rmd' Error: Vignette re-building failed. Execution halted