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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/GeomxTools_2.0.0.tar.gz && rm -rf GeomxTools.buildbin-libdir && mkdir GeomxTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeomxTools.buildbin-libdir GeomxTools_2.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL GeomxTools_2.0.0.zip && rm GeomxTools_2.0.0.tar.gz GeomxTools_2.0.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  3 4261k    3  135k    0     0   321k      0  0:00:13 --:--:--  0:00:13  321k
 31 4261k   31 1344k    0     0   946k      0  0:00:04  0:00:01  0:00:03  946k
 76 4261k   76 3274k    0     0  1360k      0  0:00:03  0:00:02  0:00:01 1360k
100 4261k  100 4261k    0     0  1553k      0  0:00:02  0:00:02 --:--:-- 1553k

install for i386

* installing *source* package 'GeomxTools' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GeomxTools'
    finding HTML links ... done
    NanoStringGeoMxSet-class                html  
    finding level-2 HTML links ... done

    aggregateCounts                         html  
    checkQCFlags-NanoStringGeoMxSet-method
                                            html  
    checkQCFlags                            html  
    countsShiftedByOne                      html  
    logtBase                                html  
    mixedModelDE                            html  
    ngeoMean                                html  
    ngeoSD                                  html  
    normalize-NanoStringGeoMxSet-method     html  
    readDccFile                             html  
    readNanoStringGeoMxSet                  html  
    readPKCFile                             html  
    setBackgroundQCFlags                    html  
    setBioProbeQCFlags                      html  
    setGeoMxQCFlags                         html  
    setQCFlags-NanoStringGeoMxSet-method    html  
    setSegmentQCFlags                       html  
    setSeqQCFlags                           html  
    shiftCountsOne                          html  
    summarizeNegatives                      html  
    writeNanoStringGeoMxSet                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GeomxTools' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GeomxTools' as GeomxTools_2.0.0.zip
* DONE (GeomxTools)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'GeomxTools' successfully unpacked and MD5 sums checked