Nicolas Delhomme
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/easyRNASeq |
| Branch: RELEASE_3_12 |
| Last Commit: e3ce60a |
| Last Changed Date: 2020-10-27 10:44:21 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:31:00 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the easyRNASeq package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 522/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| easyRNASeq 2.26.0 (landing page) Nicolas Delhomme
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: easyRNASeq |
| Version: 2.26.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/easyRNASeq_2.26.0.tar.gz && rm -rf easyRNASeq.buildbin-libdir && mkdir easyRNASeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=easyRNASeq.buildbin-libdir easyRNASeq_2.26.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL easyRNASeq_2.26.0.zip && rm easyRNASeq_2.26.0.tar.gz easyRNASeq_2.26.0.zip |
| StartedAt: 2021-05-05 18:06:30 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:08:38 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 128.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/easyRNASeq_2.26.0.tar.gz && rm -rf easyRNASeq.buildbin-libdir && mkdir easyRNASeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=easyRNASeq.buildbin-libdir easyRNASeq_2.26.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL easyRNASeq_2.26.0.zip && rm easyRNASeq_2.26.0.tar.gz easyRNASeq_2.26.0.zip
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install for i386
* installing *source* package 'easyRNASeq' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'IRanges' for request: 'values' when loading 'easyRNASeq'
Creating a generic function for 'basename' from package 'base' in package 'easyRNASeq'
Creating a generic function for 'file.exists' from package 'base' in package 'easyRNASeq'
** help
*** installing help indices
converting help for package 'easyRNASeq'
finding HTML links ... done
BiocFileCache-methods html
finding level-2 HTML links ... done
DESeq-methods html
GenomicRanges-methods html
IRanges-methods html
Rsamtools-methods html
ShortRead-methods html
basename-methods html
easyRNASeq-AnnotParam-accessors html
easyRNASeq-AnnotParam-class html
easyRNASeq-AnnotParam html
easyRNASeq-BamFileList html
easyRNASeq-BamParam-accessors html
easyRNASeq-BamParam-class html
easyRNASeq-BamParam html
easyRNASeq-RnaSeqParam-accessors html
easyRNASeq-RnaSeqParam-class html
easyRNASeq-RnaSeqParam html
easyRNASeq-accessors html
easyRNASeq-annotation-internal-methods
html
easyRNASeq-annotation-methods html
easyRNASeq-class html
easyRNASeq-correction-methods html
easyRNASeq-coverage-methods html
easyRNASeq-datasets html
easyRNASeq-defunct-annotation-methods html
easyRNASeq-defunct html
easyRNASeq-easyRNASeq html
easyRNASeq-global-variables html
easyRNASeq-internal-AnnotParam-methods
html
easyRNASeq-internal-methods html
easyRNASeq-island-methods html
easyRNASeq-package html
easyRNASeq-simpleRNASeq html
easyRNASeq-summarization-internal-methods
html
easyRNASeq-summarization-methods html
easyRNASeq-synthetic-transcripts html
edgeR-methods html
file.exists-methods html
genomeIntervals-methods html
parallel-methods html
print-methods html
show-methods html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'IRanges' for request: 'values' when loading 'easyRNASeq'
** testing if installed package can be loaded from final location
No methods found in package 'IRanges' for request: 'values' when loading 'easyRNASeq'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'easyRNASeq' ...
** testing if installed package can be loaded
No methods found in package 'IRanges' for request: 'values' when loading 'easyRNASeq'
* MD5 sums
packaged installation of 'easyRNASeq' as easyRNASeq_2.26.0.zip
* DONE (easyRNASeq)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'easyRNASeq' successfully unpacked and MD5 sums checked