Tim Peters
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/DMRcate |
| Branch: RELEASE_3_12 |
| Last Commit: bc6242a |
| Last Changed Date: 2021-01-13 23:09:44 -0400 (Wed, 13 Jan 2021) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:30:58 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the DMRcate package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 494/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| DMRcate 2.4.1 (landing page) Tim Peters
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: DMRcate |
| Version: 2.4.1 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/DMRcate_2.4.1.tar.gz && rm -rf DMRcate.buildbin-libdir && mkdir DMRcate.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMRcate.buildbin-libdir DMRcate_2.4.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL DMRcate_2.4.1.zip && rm DMRcate_2.4.1.tar.gz DMRcate_2.4.1.zip |
| StartedAt: 2021-05-05 19:10:31 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 19:12:04 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 92.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/DMRcate_2.4.1.tar.gz && rm -rf DMRcate.buildbin-libdir && mkdir DMRcate.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMRcate.buildbin-libdir DMRcate_2.4.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL DMRcate_2.4.1.zip && rm DMRcate_2.4.1.tar.gz DMRcate_2.4.1.zip
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install for i386
* installing *source* package 'DMRcate' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'minfi::getMeth' by 'bsseq::getMeth' when loading 'DMRcate'
** help
*** installing help indices
converting help for package 'DMRcate'
finding HTML links ... done
CpGannotated-class html
DMR.plot html
DMRcate-internal html
DMRcate-package html
DMResults-class html
changeFDR html
cpg.annotate html
dmrcate html
extractRanges html
rmSNPandCH html
sequencing.annotate html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'minfi::getMeth' by 'bsseq::getMeth' when loading 'DMRcate'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'minfi::getMeth' by 'bsseq::getMeth' when loading 'DMRcate'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'DMRcate' ...
** testing if installed package can be loaded
Warning: replacing previous import 'minfi::getMeth' by 'bsseq::getMeth' when loading 'DMRcate'
* MD5 sums
packaged installation of 'DMRcate' as DMRcate_2.4.1.zip
* DONE (DMRcate)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'DMRcate' successfully unpacked and MD5 sums checked