Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:57:22 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE pdInfoBuilder PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1288/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
pdInfoBuilder 1.52.0 Benilton Carvalho
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
Package: pdInfoBuilder |
Version: 1.52.0 |
Command: rm -rf pdInfoBuilder.buildbin-libdir && mkdir pdInfoBuilder.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pdInfoBuilder.buildbin-libdir pdInfoBuilder_1.52.0.tar.gz |
StartedAt: 2020-10-17 11:14:49 -0400 (Sat, 17 Oct 2020) |
EndedAt: 2020-10-17 11:15:33 -0400 (Sat, 17 Oct 2020) |
EllapsedTime: 44.4 seconds |
RetCode: 0 |
Status: OK |
PackageFile: pdInfoBuilder_1.52.0.zip |
PackageFileSize: 832.5 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf pdInfoBuilder.buildbin-libdir && mkdir pdInfoBuilder.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pdInfoBuilder.buildbin-libdir pdInfoBuilder_1.52.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'pdInfoBuilder' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c pdInfoBuilder.c -o pdInfoBuilder.o C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o pdInfoBuilder.dll tmp.def pdInfoBuilder.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/pdInfoBuilder.buildbin-libdir/00LOCK-pdInfoBuilder/00new/pdInfoBuilder/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'oligo' No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'pdInfoBuilder' ** help *** installing help indices converting help for package 'pdInfoBuilder' finding HTML links ... done AffyClariomSPDInfoPkgSeed-class html AffyExpressionPDInfoPkgSeed-class html AffySNPCNVPDInfoPkgSeed-class html AffySNPCNVPDInfoPkgSeed2-class html AffySNPPDInfoPkgSeed-class html AffySNPPDInfoPkgSeed2-class html AffySTPDInfoPkgSeed-class html AffyTilingPDInfoPkgSeed-class html GenericArrayFunctions html NgsExpressionPDInfoPkgSeed-class html NgsTilingPDInfoPkgSeed-class html NimbleGenPDInfoPkgSeed-class html chipName html getGeometry html makePdInfoPackage html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'oligo' No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'pdInfoBuilder' ** testing if installed package can be loaded from final location No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'oligo' No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'pdInfoBuilder' ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'pdInfoBuilder' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c pdInfoBuilder.c -o pdInfoBuilder.o C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o pdInfoBuilder.dll tmp.def pdInfoBuilder.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/pdInfoBuilder.buildbin-libdir/pdInfoBuilder/libs/x64 ** testing if installed package can be loaded No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'oligo' No methods found in package 'RSQLite' for request: 'dbGetQuery' when loading 'pdInfoBuilder' * MD5 sums packaged installation of 'pdInfoBuilder' as pdInfoBuilder_1.52.0.zip * DONE (pdInfoBuilder)