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###
### Running command:
###
###   C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:metabomxtr.install-out.txt --library=C:\Users\biocbuild\bbs-3.11-bioc\R\library --no-vignettes --timings metabomxtr_1.22.0.tar.gz
###
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* using log directory 'C:/Users/biocbuild/bbs-3.11-bioc/meat/metabomxtr.Rcheck'
* using R version 4.0.3 (2020-10-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'metabomxtr/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'metabomxtr' version '1.22.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'metabomxtr' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
metabplot          1.07   0.11    9.81
metabomxtr-package 1.00   0.06   22.23
mxtrmod            0.89   0.00   22.93
mxtrmodLRT         0.59   0.02   10.97
mixnorm            0.30   0.00    8.57
** running examples for arch 'x64' ... OK
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
metabomxtr-package 1.49   0.02   21.18
mxtrmod            1.28   0.03   24.22
metabplot          1.15   0.06    9.90
mxtrmodLRT         0.81   0.02   11.21
mixnorm            0.44   0.00   10.54
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: OK

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/metabomxtr_1.22.0.tar.gz && rm -rf metabomxtr.buildbin-libdir && mkdir metabomxtr.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metabomxtr.buildbin-libdir metabomxtr_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL metabomxtr_1.22.0.zip && rm metabomxtr_1.22.0.tar.gz metabomxtr_1.22.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 60139  100 60139    0     0   839k      0 --:--:-- --:--:-- --:--:--  932k

install for i386

* installing *source* package 'metabomxtr' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'metabomxtr'
    finding HTML links ... done
    addBatchMeans                           html  
    addOutlierInfo                          html  
    allMissingLevels                        html  
    anyMissingLevels                        html  
    euMetabCData                            html  
    euMetabData                             html  
    idMissingLevels                         html  
    metabdata                               html  
    metabomxtr-package                      html  
    metabplot                               html  
    mixnorm                                 html  
    mxtrmod                                 html  
    mxtrmodLL                               html  
    mxtrmodLRT                              html  
    mxtrmodstart                            html  
    removeAllMissingCatVar                  html  
    removeMissingLevels                     html  
    runMxtrmod                              html  
    xdesign-methods                         html  
    yvals-methods                           html  
    zdesign-methods                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'metabomxtr' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'metabomxtr' as metabomxtr_1.22.0.zip
* DONE (metabomxtr)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'metabomxtr' successfully unpacked and MD5 sums checked