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Package 52/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
cosmo1.3.0Oliver BembomLast Changed Date: 2007-04-24 11:31:42 -0700 Last Changed Rev: 24217 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
churchill | Solaris 2.9 | sparc | OK | OK | ||
lemming | Windows Server 2003 (32-bit) | x64 | OK | [ OK ] | OK |
Package: cosmo |
Version: 1.3.0 |
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check cosmo_1.3.0.tar.gz |
RetCode: 0 |
Time: 165.9 seconds |
Status: OK |
CheckDir: cosmo.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory 'D:/biocbld/bbs-2.1-bioc/meat/cosmo.Rcheck' * using R version 2.6.0 Under development (unstable) (2007-04-17 r41210) * checking for file 'cosmo/DESCRIPTION' ... OK * this is package 'cosmo' version '1.3.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'cosmo' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * checking for CRLF line endings in C/C++/Fortran sources/headers ... OK * checking for portable compilation flags in Makevars ... OK * checking for portable use of $BLAS_LIBS ... OK * creating cosmo-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating cosmo-manual.tex ... OK * checking cosmo-manual.tex ... OK
cosmo.Rcheck/00install.out:
installing R.css in D:/biocbld/bbs-2.1-bioc/meat/cosmo.Rcheck ---------- Making package cosmo ------------ adding build stamp to DESCRIPTION installing NAMESPACE file and metadata making DLL ... making alloc.d from alloc.c making back.d from back.c making constraints.d from constraints.c making cosmo.d from cosmo.c making cregistration.d from cregistration.c making donlp2.d from donlp2.c making estarts.d from estarts.c making eval.d from eval.c making fit.d from fit.c making free.d from free.c making init.d from init.c making io.d from io.c making lstarts.d from lstarts.c making matLib.d from matLib.c making newx.d from newx.c making optimize.d from optimize.c making posterior.d from posterior.c making precalc.d from precalc.c making rio.d from rio.c making theta.d from theta.c making user_eval.d from user_eval.c making xml.d from xml.c gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c alloc.c -o alloc.o gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c back.c -o back.o gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c constraints.c -o constraints.o gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c cosmo.c -o cosmo.o gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c cregistration.c -o cregistration.o gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c donlp2.c -o donlp2.o donlp2.c: In function `o8st': donlp2.c:438: warning: unused variable `k' donlp2.c:439: warning: unused variable `tol1' donlp2.c:439: warning: unused variable `bd0' donlp2.c:439: warning: unused variable `gxi' donlp2.c:439: warning: unused variable `hxi' donlp2.c:439: warning: unused variable `term' donlp2.c: In function `o8opti': donlp2.c:2055: warning: unused variable `l' donlp2.c:2068: warning: unused variable `eval_err' donlp2.c: In function `o8dird': donlp2.c:4096: warning: unused variable `term1' donlp2.c:4100: warning: label `L100' defined but not used donlp2.c: In function `o8eval': donlp2.c:4387: warning: unused variable `j' donlp2.c: In function `o8elim': donlp2.c:5003: warning: unused variable `l' donlp2.c: In function `o8qpdu': donlp2.c:5731: warning: unused variable `term2' donlp2.c:6394: warning: label `L500' defined but not used donlp2.c: In function `o8dlcd': donlp2.c:7129: warning: label `L20' defined but not used donlp2.c: In function `i1_malloc': donlp2.c:7849: warning: unused variable `j' donlp2.c: In function `i1_free': donlp2.c:7886: warning: unused variable `i' donlp2.c: In function `d1_malloc': donlp2.c:7979: warning: unused variable `j' donlp2.c: In function `d1_free': donlp2.c:8014: warning: unused variable `i' donlp2.c: In function `l1_malloc': donlp2.c:8108: warning: unused variable `j' donlp2.c: In function `l1_free': donlp2.c:8143: warning: unused variable `i' donlp2.c: At top level: INCLUDE/o8gene.h:23: warning: 'o8fcount' defined but not used gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c estarts.c -o estarts.o gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c eval.c -o eval.o eval.c: In function `init_llr_pv_tables': eval.c:99: warning: unused variable `n' gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c fit.c -o fit.o fit.c: In function `getCvPwmRisk': fit.c:794: warning: 'nnSites' might be used uninitialized in this function fit.c:795: warning: 'numSv' might be used uninitialized in this function fit.c:804: warning: 'numSites0' might be used uninitialized in this function gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c free.c -o free.o gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c init.c -o init.o gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c io.c -o io.o gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c lstarts.c -o lstarts.o gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c matLib.c -o matLib.o gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c newx.c -o newx.o newx.c: In function `newx': INCLUDE/o8fuco.h:5: warning: unused variable `o8val' INCLUDE/o8fuco.h:5: warning: unused variable `o8llow' INCLUDE/o8fuco.h:5: warning: unused variable `o8lup' INCLUDE/o8fuco.h:7: warning: unused variable `o8n' INCLUDE/o8fuco.h:7: warning: unused variable `o8nr' INCLUDE/o8fuco.h:7: warning: unused variable `o8nres' INCLUDE/o8fuco.h:7: warning: unused variable `o8nlin' INCLUDE/o8fuco.h:7: warning: unused variable `o8nonlin' INCLUDE/o8fuco.h:7: warning: unused variable `o8nstep' INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm' INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm' INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif' INCLUDE/o8fuco.h:11: warning: unused variable `o8name' INCLUDE/o8fuco.h:13: warning: unused variable `o8epsdif' INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt' INCLUDE/o8fuco.h:15: warning: unused variable `o8te0' INCLUDE/o8fuco.h:15: warning: unused variable `o8te1' INCLUDE/o8fuco.h:15: warning: unused variable `o8te2' INCLUDE/o8fuco.h:15: warning: unused variable `o8te3' INCLUDE/o8fuco.h:16: warning: unused variable `o8ident' INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres' INCLUDE/o8fuco.h:16: warning: unused variable `o8silent' INCLUDE/o8fuco.h:16: warning: unused variable `o8analyt' INCLUDE/o8fuco.h:16: warning: unused variable `o8cold' INCLUDE/o8fuco.h:18: warning: unused variable `o8icf' INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf' INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr' INCLUDE/o8fuco.h:18: warning: unused variable `o8cres' INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres' INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr' INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr' INCLUDE/o8fuco.h:25: warning: unused variable `o8nh' INCLUDE/o8fuco.h:25: warning: unused variable `o8ng' INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist' INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit' INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst' INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr' gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c optimize.c -o optimize.o optimize.c: In function `user_init_size': INCLUDE/o8fuco.h:5: warning: unused variable `o8val' INCLUDE/o8fuco.h:5: warning: unused variable `o8llow' INCLUDE/o8fuco.h:5: warning: unused variable `o8lup' INCLUDE/o8fuco.h:7: warning: unused variable `o8nr' INCLUDE/o8fuco.h:7: warning: unused variable `o8nres' INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm' INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm' INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif' INCLUDE/o8fuco.h:11: warning: unused variable `o8name' INCLUDE/o8fuco.h:13: warning: unused variable `o8epsdif' INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt' INCLUDE/o8fuco.h:15: warning: unused variable `o8te0' INCLUDE/o8fuco.h:15: warning: unused variable `o8te1' INCLUDE/o8fuco.h:15: warning: unused variable `o8te2' INCLUDE/o8fuco.h:15: warning: unused variable `o8te3' INCLUDE/o8fuco.h:15: warning: unused variable `o8singul' INCLUDE/o8fuco.h:16: warning: unused variable `o8ident' INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres' INCLUDE/o8fuco.h:16: warning: unused variable `o8silent' INCLUDE/o8fuco.h:16: warning: unused variable `o8analyt' INCLUDE/o8fuco.h:16: warning: unused variable `o8cold' INCLUDE/o8fuco.h:18: warning: unused variable `o8icf' INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf' INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr' INCLUDE/o8fuco.h:18: warning: unused variable `o8cres' INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres' INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr' INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr' INCLUDE/o8fuco.h:25: warning: unused variable `o8nh' INCLUDE/o8fuco.h:25: warning: unused variable `o8ng' INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist' INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit' INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst' INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr' INCLUDE/o8fuco.h:38: warning: unused variable `o8numSinguls' INCLUDE/o8comm.h:12: warning: unused variable `o8runtim' INCLUDE/o8comm.h:13: warning: unused variable `o8optite' INCLUDE/o8comm.h:14: warning: unused variable `o8accinf' INCLUDE/o8comm.h:15: warning: unused variable `o8itstep' INCLUDE/o8comm.h:15: warning: unused variable `o8phase' INCLUDE/o8comm.h:17: warning: unused variable `o8upsi' INCLUDE/o8comm.h:17: warning: unused variable `o8upsi0' INCLUDE/o8comm.h:17: warning: unused variable `o8upsi1' INCLUDE/o8comm.h:17: warning: unused variable `o8upsist' INCLUDE/o8comm.h:17: warning: unused variable `o8psi' INCLUDE/o8comm.h:17: warning: unused variable `o8psi0' INCLUDE/o8comm.h:18: warning: unused variable `o8psi1' INCLUDE/o8comm.h:18: warning: unused variable `o8psist' INCLUDE/o8comm.h:18: warning: unused variable `o8psimin' INCLUDE/o8comm.h:19: warning: unused variable `o8phi' INCLUDE/o8comm.h:19: warning: unused variable `o8phi0' INCLUDE/o8comm.h:19: warning: unused variable `o8phi1' INCLUDE/o8comm.h:19: warning: unused variable `o8phimin' INCLUDE/o8comm.h:19: warning: unused variable `o8fx' INCLUDE/o8comm.h:19: warning: unused variable `o8fx0' INCLUDE/o8comm.h:19: warning: unused variable `o8fx1' INCLUDE/o8comm.h:20: warning: unused variable `o8fxst' INCLUDE/o8comm.h:20: warning: unused variable `o8fmin' INCLUDE/o8comm.h:20: warning: unused variable `o8b2n' INCLUDE/o8comm.h:20: warning: unused variable `o8b2n0' INCLUDE/o8comm.h:20: warning: unused variable `o8xnorm' INCLUDE/o8comm.h:20: warning: unused variable `o8x0norm' INCLUDE/o8comm.h:20: warning: unused variable `o8sig0' INCLUDE/o8comm.h:20: warning: unused variable `o8dscal' INCLUDE/o8comm.h:20: warning: unused variable `o8dnorm' INCLUDE/o8comm.h:20: warning: unused variable `o8d0norm' INCLUDE/o8comm.h:21: warning: unused variable `o8sig' INCLUDE/o8comm.h:21: warning: unused variable `o8sigmin' INCLUDE/o8comm.h:21: warning: unused variable `o8dirder' INCLUDE/o8comm.h:21: warning: unused variable `o8cosphi' INCLUDE/o8comm.h:21: warning: unused variable `o8upsim' INCLUDE/o8comm.h:22: warning: unused variable `o8x' INCLUDE/o8comm.h:22: warning: unused variable `o8x0' INCLUDE/o8comm.h:22: warning: unused variable `o8x1' INCLUDE/o8comm.h:22: warning: unused variable `o8xmin' INCLUDE/o8comm.h:22: warning: unused variable `o8d' INCLUDE/o8comm.h:22: warning: unused variable `o8d0' INCLUDE/o8comm.h:23: warning: unused variable `o8dd' INCLUDE/o8comm.h:23: warning: unused variable `o8difx' INCLUDE/o8comm.h:23: warning: unused variable `o8resmin' INCLUDE/o8comm.h:25: warning: unused variable `o8gradf' INCLUDE/o8comm.h:25: warning: unused variable `o8gfn' INCLUDE/o8comm.h:25: warning: unused variable `o8qgf' INCLUDE/o8comm.h:25: warning: unused variable `o8gphi0' INCLUDE/o8comm.h:25: warning: unused variable `o8gphi1' INCLUDE/o8comm.h:26: warning: unused variable `o8gres' INCLUDE/o8comm.h:26: warning: unused variable `o8gresn' INCLUDE/o8comm.h:28: warning: unused variable `o8perm' INCLUDE/o8comm.h:28: warning: unused variable `o8perm1' INCLUDE/o8comm.h:28: warning: unused variable `o8colno' INCLUDE/o8comm.h:28: warning: unused variable `o8rank' INCLUDE/o8comm.h:29: warning: unused variable `o8qr' INCLUDE/o8comm.h:29: warning: unused variable `o8betaq' INCLUDE/o8comm.h:29: warning: unused variable `o8diag' INCLUDE/o8comm.h:30: warning: unused variable `o8cscal' INCLUDE/o8comm.h:31: warning: unused variable `o8colle' INCLUDE/o8comm.h:35: warning: unused variable `o8a' INCLUDE/o8comm.h:35: warning: unused variable `o8scalm' INCLUDE/o8comm.h:35: warning: unused variable `o8scalm2' INCLUDE/o8comm.h:35: warning: unused variable `o8diag0' INCLUDE/o8comm.h:35: warning: unused variable `o8matsc' INCLUDE/o8comm.h:37: warning: unused variable `o8violis' INCLUDE/o8comm.h:37: warning: unused variable `o8alist' INCLUDE/o8comm.h:37: warning: unused variable `o8bind' INCLUDE/o8comm.h:38: warning: unused variable `o8bind0' INCLUDE/o8comm.h:38: warning: unused variable `o8aalist' INCLUDE/o8comm.h:38: warning: unused variable `o8clist' INCLUDE/o8comm.h:40: warning: unused variable `o8u' INCLUDE/o8comm.h:40: warning: unused variable `o8u0' INCLUDE/o8comm.h:41: warning: unused variable `o8w' INCLUDE/o8comm.h:41: warning: unused variable `o8w1' INCLUDE/o8comm.h:41: warning: unused variable `o8res' INCLUDE/o8comm.h:42: warning: unused variable `o8res0' INCLUDE/o8comm.h:42: warning: unused variable `o8res1' INCLUDE/o8comm.h:43: warning: unused variable `o8resst' INCLUDE/o8comm.h:43: warning: unused variable `o8scf' INCLUDE/o8comm.h:43: warning: unused variable `o8scf0' INCLUDE/o8comm.h:44: warning: unused variable `o8yu' INCLUDE/o8comm.h:44: warning: unused variable `o8slack' INCLUDE/o8comm.h:44: warning: unused variable `o8infeas' INCLUDE/o8comm.h:44: warning: unused variable `o8work' INCLUDE/o8comm.h:47: warning: unused variable `o8del' INCLUDE/o8comm.h:47: warning: unused variable `o8del0' INCLUDE/o8comm.h:47: warning: unused variable `o8del01' INCLUDE/o8comm.h:47: warning: unused variable `o8delmin' INCLUDE/o8comm.h:47: warning: unused variable `o8tau0' INCLUDE/o8comm.h:47: warning: unused variable `o8tau' INCLUDE/o8comm.h:47: warning: unused variable `o8ny' INCLUDE/o8comm.h:48: warning: unused variable `o8smalld' INCLUDE/o8comm.h:48: warning: unused variable `o8smallw' INCLUDE/o8comm.h:48: warning: unused variable `o8rho' INCLUDE/o8comm.h:48: warning: unused variable `o8rho1' INCLUDE/o8comm.h:48: warning: unused variable `o8eta' INCLUDE/o8comm.h:48: warning: unused variable `o8epsx' INCLUDE/o8comm.h:48: warning: unused variable `o8c1d' INCLUDE/o8comm.h:49: warning: unused variable `o8scfmax' INCLUDE/o8comm.h:49: warning: unused variable `o8updmy0' INCLUDE/o8comm.h:49: warning: unused variable `o8tauqp' INCLUDE/o8comm.h:49: warning: unused variable `o8taufac' INCLUDE/o8comm.h:49: warning: unused variable `o8taumax' INCLUDE/o8comm.h:51: warning: unused variable `o8alpha' INCLUDE/o8comm.h:51: warning: unused variable `o8beta' INCLUDE/o8comm.h:51: warning: unused variable `o8theta' INCLUDE/o8comm.h:51: warning: unused variable `o8sigsm' INCLUDE/o8comm.h:51: warning: unused variable `o8sigla' INCLUDE/o8comm.h:51: warning: unused variable `o8delta' INCLUDE/o8comm.h:51: warning: unused variable `o8stptrm' INCLUDE/o8comm.h:52: warning: unused variable `o8delta1' INCLUDE/o8comm.h:52: warning: unused variable `o8stmaxl' INCLUDE/o8comm.h:54: warning: unused variable `o8level' INCLUDE/o8comm.h:55: warning: unused variable `o8clow' INCLUDE/o8comm.h:55: warning: unused variable `o8lastdw' INCLUDE/o8comm.h:55: warning: unused variable `o8lastup' INCLUDE/o8comm.h:55: warning: unused variable `o8lastch' INCLUDE/o8comm.h:57: warning: unused variable `o8prou' INCLUDE/o8comm.h:57: warning: unused variable `o8meu' INCLUDE/o8comm.h:59: warning: unused variable `o8ug' INCLUDE/o8comm.h:59: warning: unused variable `o8og' INCLUDE/o8comm.h:61: warning: unused variable `o8low' INCLUDE/o8comm.h:61: warning: unused variable `o8up' INCLUDE/o8comm.h:61: warning: unused variable `o8big' INCLUDE/o8comm.h:63: warning: unused variable `o8nreset' INCLUDE/o8comm.h:65: warning: unused variable `o8xst' INCLUDE/o8comm.h:68: warning: unused variable `o8epsphi' INCLUDE/o8fint.h:23: warning: unused variable `o8bloc' INCLUDE/o8fint.h:23: warning: unused variable `o8valid' INCLUDE/o8fint.h:23: warning: unused variable `o8corr' INCLUDE/o8fint.h:24: warning: unused variable `o8difftype' INCLUDE/o8fint.h:25: warning: unused variable `o8xtr' INCLUDE/o8fint.h:25: warning: unused variable `o8xsc' INCLUDE/o8fint.h:25: warning: unused variable `o8fu' INCLUDE/o8fint.h:25: warning: unused variable `o8fugrad' INCLUDE/o8fint.h:26: warning: unused variable `o8fud' INCLUDE/o8fint.h:26: warning: unused variable `o8epsfcn' INCLUDE/o8fint.h:26: warning: unused variable `o8taubnd' INCLUDE/o8cons.h:4: warning: unused variable `o8zero' INCLUDE/o8cons.h:4: warning: unused variable `o8one' INCLUDE/o8cons.h:4: warning: unused variable `o8two' INCLUDE/o8cons.h:4: warning: unused variable `o8three' INCLUDE/o8cons.h:4: warning: unused variable `o8four' INCLUDE/o8cons.h:5: warning: unused variable `o8five' INCLUDE/o8cons.h:5: warning: unused variable `o8six' INCLUDE/o8cons.h:5: warning: unused variable `o8seven' INCLUDE/o8cons.h:6: warning: unused variable `o8twom2' INCLUDE/o8cons.h:6: warning: unused variable `o8twop4' INCLUDE/o8cons.h:6: warning: unused variable `o8twop11' INCLUDE/o8cons.h:6: warning: unused variable `o8onep3' INCLUDE/o8cons.h:7: warning: unused variable `o8onep5' INCLUDE/o8cons.h:7: warning: unused variable `o8p2' INCLUDE/o8cons.h:7: warning: unused variable `o8p4' INCLUDE/o8cons.h:7: warning: unused variable `o8p5' INCLUDE/o8cons.h:7: warning: unused variable `o8p7' INCLUDE/o8cons.h:7: warning: unused variable `o8p8' INCLUDE/o8cons.h:7: warning: unused variable `o8p9' INCLUDE/o8cons.h:8: warning: unused variable `o8c45' INCLUDE/o8cons.h:8: warning: unused variable `o8tm12' INCLUDE/o8cons.h:9: warning: unused variable `o8tm10' INCLUDE/o8cons.h:9: warning: unused variable `o8tm9' INCLUDE/o8cons.h:9: warning: unused variable `o8tm8' INCLUDE/o8cons.h:9: warning: unused variable `o8tm7' INCLUDE/o8cons.h:9: warning: unused variable `o8tm6' INCLUDE/o8cons.h:9: warning: unused variable `o8tm5' INCLUDE/o8cons.h:10: warning: unused variable `o8tm4' INCLUDE/o8cons.h:10: warning: unused variable `o8tm3' INCLUDE/o8cons.h:10: warning: unused variable `o8tm2' INCLUDE/o8cons.h:10: warning: unused variable `o8tm1' INCLUDE/o8cons.h:10: warning: unused variable `o8tp1' INCLUDE/o8cons.h:10: warning: unused variable `o8tp2' INCLUDE/o8cons.h:11: warning: unused variable `o8tp3' INCLUDE/o8cons.h:11: warning: unused variable `o8tp4' optimize.c: In function `user_init': INCLUDE/o8fuco.h:5: warning: unused variable `o8val' INCLUDE/o8fuco.h:5: warning: unused variable `o8llow' INCLUDE/o8fuco.h:5: warning: unused variable `o8lup' INCLUDE/o8fuco.h:7: warning: unused variable `o8nr' INCLUDE/o8fuco.h:7: warning: unused variable `o8nres' INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm' INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm' INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif' INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt' INCLUDE/o8fuco.h:15: warning: unused variable `o8te0' INCLUDE/o8fuco.h:15: warning: unused variable `o8te1' INCLUDE/o8fuco.h:15: warning: unused variable `o8te2' INCLUDE/o8fuco.h:15: warning: unused variable `o8te3' INCLUDE/o8fuco.h:15: warning: unused variable `o8singul' INCLUDE/o8fuco.h:16: warning: unused variable `o8ident' INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres' INCLUDE/o8fuco.h:16: warning: unused variable `o8cold' INCLUDE/o8fuco.h:18: warning: unused variable `o8icf' INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf' INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr' INCLUDE/o8fuco.h:18: warning: unused variable `o8cres' INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres' INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr' INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr' INCLUDE/o8fuco.h:25: warning: unused variable `o8nh' INCLUDE/o8fuco.h:25: warning: unused variable `o8ng' INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist' INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit' INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst' INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr' INCLUDE/o8fuco.h:38: warning: unused variable `o8numSinguls' INCLUDE/o8comm.h:12: warning: unused variable `o8runtim' INCLUDE/o8comm.h:13: warning: unused variable `o8optite' INCLUDE/o8comm.h:14: warning: unused variable `o8accinf' INCLUDE/o8comm.h:15: warning: unused variable `o8itstep' INCLUDE/o8comm.h:15: warning: unused variable `o8phase' INCLUDE/o8comm.h:17: warning: unused variable `o8upsi' INCLUDE/o8comm.h:17: warning: unused variable `o8upsi0' INCLUDE/o8comm.h:17: warning: unused variable `o8upsi1' INCLUDE/o8comm.h:17: warning: unused variable `o8upsist' INCLUDE/o8comm.h:17: warning: unused variable `o8psi' INCLUDE/o8comm.h:17: warning: unused variable `o8psi0' INCLUDE/o8comm.h:18: warning: unused variable `o8psi1' INCLUDE/o8comm.h:18: warning: unused variable `o8psist' INCLUDE/o8comm.h:18: warning: unused variable `o8psimin' INCLUDE/o8comm.h:19: warning: unused variable `o8phi' INCLUDE/o8comm.h:19: warning: unused variable `o8phi0' INCLUDE/o8comm.h:19: warning: unused variable `o8phi1' INCLUDE/o8comm.h:19: warning: unused variable `o8phimin' INCLUDE/o8comm.h:19: warning: unused variable `o8fx' INCLUDE/o8comm.h:19: warning: unused variable `o8fx0' INCLUDE/o8comm.h:19: warning: unused variable `o8fx1' INCLUDE/o8comm.h:20: warning: unused variable `o8fxst' INCLUDE/o8comm.h:20: warning: unused variable `o8fmin' INCLUDE/o8comm.h:20: warning: unused variable `o8b2n' INCLUDE/o8comm.h:20: warning: unused variable `o8b2n0' INCLUDE/o8comm.h:20: warning: unused variable `o8xnorm' INCLUDE/o8comm.h:20: warning: unused variable `o8x0norm' INCLUDE/o8comm.h:20: warning: unused variable `o8sig0' INCLUDE/o8comm.h:20: warning: unused variable `o8dscal' INCLUDE/o8comm.h:20: warning: unused variable `o8dnorm' INCLUDE/o8comm.h:20: warning: unused variable `o8d0norm' INCLUDE/o8comm.h:21: warning: unused variable `o8sig' INCLUDE/o8comm.h:21: warning: unused variable `o8sigmin' INCLUDE/o8comm.h:21: warning: unused variable `o8dirder' INCLUDE/o8comm.h:21: warning: unused variable `o8cosphi' INCLUDE/o8comm.h:21: warning: unused variable `o8upsim' INCLUDE/o8comm.h:22: warning: unused variable `o8x0' INCLUDE/o8comm.h:22: warning: unused variable `o8x1' INCLUDE/o8comm.h:22: warning: unused variable `o8xmin' INCLUDE/o8comm.h:22: warning: unused variable `o8d' INCLUDE/o8comm.h:22: warning: unused variable `o8d0' INCLUDE/o8comm.h:23: warning: unused variable `o8dd' INCLUDE/o8comm.h:23: warning: unused variable `o8difx' INCLUDE/o8comm.h:23: warning: unused variable `o8resmin' INCLUDE/o8comm.h:25: warning: unused variable `o8gradf' INCLUDE/o8comm.h:25: warning: unused variable `o8gfn' INCLUDE/o8comm.h:25: warning: unused variable `o8qgf' INCLUDE/o8comm.h:25: warning: unused variable `o8gphi0' INCLUDE/o8comm.h:25: warning: unused variable `o8gphi1' INCLUDE/o8comm.h:26: warning: unused variable `o8gresn' INCLUDE/o8comm.h:28: warning: unused variable `o8perm' INCLUDE/o8comm.h:28: warning: unused variable `o8perm1' INCLUDE/o8comm.h:28: warning: unused variable `o8colno' INCLUDE/o8comm.h:28: warning: unused variable `o8rank' INCLUDE/o8comm.h:29: warning: unused variable `o8qr' INCLUDE/o8comm.h:29: warning: unused variable `o8betaq' INCLUDE/o8comm.h:29: warning: unused variable `o8diag' INCLUDE/o8comm.h:30: warning: unused variable `o8cscal' INCLUDE/o8comm.h:31: warning: unused variable `o8colle' INCLUDE/o8comm.h:35: warning: unused variable `o8a' INCLUDE/o8comm.h:35: warning: unused variable `o8scalm' INCLUDE/o8comm.h:35: warning: unused variable `o8scalm2' INCLUDE/o8comm.h:35: warning: unused variable `o8diag0' INCLUDE/o8comm.h:35: warning: unused variable `o8matsc' INCLUDE/o8comm.h:37: warning: unused variable `o8violis' INCLUDE/o8comm.h:37: warning: unused variable `o8alist' INCLUDE/o8comm.h:37: warning: unused variable `o8bind' INCLUDE/o8comm.h:38: warning: unused variable `o8bind0' INCLUDE/o8comm.h:38: warning: unused variable `o8aalist' INCLUDE/o8comm.h:38: warning: unused variable `o8clist' INCLUDE/o8comm.h:40: warning: unused variable `o8u' INCLUDE/o8comm.h:40: warning: unused variable `o8u0' INCLUDE/o8comm.h:41: warning: unused variable `o8w' INCLUDE/o8comm.h:41: warning: unused variable `o8w1' INCLUDE/o8comm.h:41: warning: unused variable `o8res' INCLUDE/o8comm.h:42: warning: unused variable `o8res0' INCLUDE/o8comm.h:42: warning: unused variable `o8res1' INCLUDE/o8comm.h:43: warning: unused variable `o8resst' INCLUDE/o8comm.h:43: warning: unused variable `o8scf' INCLUDE/o8comm.h:43: warning: unused variable `o8scf0' INCLUDE/o8comm.h:44: warning: unused variable `o8yu' INCLUDE/o8comm.h:44: warning: unused variable `o8slack' INCLUDE/o8comm.h:44: warning: unused variable `o8infeas' INCLUDE/o8comm.h:44: warning: unused variable `o8work' INCLUDE/o8comm.h:47: warning: unused variable `o8del' INCLUDE/o8comm.h:47: warning: unused variable `o8del01' INCLUDE/o8comm.h:47: warning: unused variable `o8delmin' INCLUDE/o8comm.h:47: warning: unused variable `o8ny' INCLUDE/o8comm.h:48: warning: unused variable `o8smalld' INCLUDE/o8comm.h:48: warning: unused variable `o8smallw' INCLUDE/o8comm.h:48: warning: unused variable `o8rho' INCLUDE/o8comm.h:48: warning: unused variable `o8rho1' INCLUDE/o8comm.h:48: warning: unused variable `o8eta' INCLUDE/o8comm.h:48: warning: unused variable `o8epsx' INCLUDE/o8comm.h:48: warning: unused variable `o8c1d' INCLUDE/o8comm.h:49: warning: unused variable `o8scfmax' INCLUDE/o8comm.h:49: warning: unused variable `o8updmy0' INCLUDE/o8comm.h:49: warning: unused variable `o8tauqp' INCLUDE/o8comm.h:49: warning: unused variable `o8taufac' INCLUDE/o8comm.h:49: warning: unused variable `o8taumax' INCLUDE/o8comm.h:51: warning: unused variable `o8alpha' INCLUDE/o8comm.h:51: warning: unused variable `o8beta' INCLUDE/o8comm.h:51: warning: unused variable `o8theta' INCLUDE/o8comm.h:51: warning: unused variable `o8sigsm' INCLUDE/o8comm.h:51: warning: unused variable `o8sigla' INCLUDE/o8comm.h:51: warning: unused variable `o8delta' INCLUDE/o8comm.h:51: warning: unused variable `o8stptrm' INCLUDE/o8comm.h:52: warning: unused variable `o8delta1' INCLUDE/o8comm.h:52: warning: unused variable `o8stmaxl' INCLUDE/o8comm.h:54: warning: unused variable `o8level' INCLUDE/o8comm.h:55: warning: unused variable `o8clow' INCLUDE/o8comm.h:55: warning: unused variable `o8lastdw' INCLUDE/o8comm.h:55: warning: unused variable `o8lastup' INCLUDE/o8comm.h:55: warning: unused variable `o8lastch' INCLUDE/o8comm.h:57: warning: unused variable `o8prou' INCLUDE/o8comm.h:57: warning: unused variable `o8meu' INCLUDE/o8comm.h:59: warning: unused variable `o8ug' INCLUDE/o8comm.h:59: warning: unused variable `o8og' INCLUDE/o8comm.h:65: warning: unused variable `o8xst' INCLUDE/o8comm.h:68: warning: unused variable `o8epsphi' INCLUDE/o8fint.h:23: warning: unused variable `o8bloc' INCLUDE/o8fint.h:23: warning: unused variable `o8valid' INCLUDE/o8fint.h:23: warning: unused variable `o8corr' INCLUDE/o8fint.h:25: warning: unused variable `o8xtr' INCLUDE/o8fint.h:25: warning: unused variable `o8xsc' INCLUDE/o8fint.h:25: warning: unused variable `o8fu' INCLUDE/o8fint.h:25: warning: unused variable `o8fugrad' INCLUDE/o8fint.h:26: warning: unused variable `o8fud' INCLUDE/o8cons.h:4: warning: unused variable `o8zero' INCLUDE/o8cons.h:4: warning: unused variable `o8one' INCLUDE/o8cons.h:4: warning: unused variable `o8two' INCLUDE/o8cons.h:4: warning: unused variable `o8three' INCLUDE/o8cons.h:4: warning: unused variable `o8four' INCLUDE/o8cons.h:5: warning: unused variable `o8five' INCLUDE/o8cons.h:5: warning: unused variable `o8six' INCLUDE/o8cons.h:5: warning: unused variable `o8seven' INCLUDE/o8cons.h:6: warning: unused variable `o8twom2' INCLUDE/o8cons.h:6: warning: unused variable `o8twop4' INCLUDE/o8cons.h:6: warning: unused variable `o8twop11' INCLUDE/o8cons.h:6: warning: unused variable `o8onep3' INCLUDE/o8cons.h:7: warning: unused variable `o8onep5' INCLUDE/o8cons.h:7: warning: unused variable `o8p2' INCLUDE/o8cons.h:7: warning: unused variable `o8p4' INCLUDE/o8cons.h:7: warning: unused variable `o8p5' INCLUDE/o8cons.h:7: warning: unused variable `o8p7' INCLUDE/o8cons.h:7: warning: unused variable `o8p8' INCLUDE/o8cons.h:7: warning: unused variable `o8p9' INCLUDE/o8cons.h:8: warning: unused variable `o8c45' INCLUDE/o8cons.h:8: warning: unused variable `o8tm12' INCLUDE/o8cons.h:9: warning: unused variable `o8tm10' INCLUDE/o8cons.h:9: warning: unused variable `o8tm9' INCLUDE/o8cons.h:9: warning: unused variable `o8tm8' INCLUDE/o8cons.h:9: warning: unused variable `o8tm7' INCLUDE/o8cons.h:9: warning: unused variable `o8tm6' INCLUDE/o8cons.h:9: warning: unused variable `o8tm5' INCLUDE/o8cons.h:10: warning: unused variable `o8tm4' INCLUDE/o8cons.h:10: warning: unused variable `o8tm3' INCLUDE/o8cons.h:10: warning: unused variable `o8tm2' INCLUDE/o8cons.h:10: warning: unused variable `o8tm1' INCLUDE/o8cons.h:10: warning: unused variable `o8tp1' INCLUDE/o8cons.h:10: warning: unused variable `o8tp2' INCLUDE/o8cons.h:11: warning: unused variable `o8tp3' INCLUDE/o8cons.h:11: warning: unused variable `o8tp4' optimize.c: In function `setup': INCLUDE/o8fuco.h:5: warning: unused variable `o8val' INCLUDE/o8fuco.h:5: warning: unused variable `o8llow' INCLUDE/o8fuco.h:5: warning: unused variable `o8lup' INCLUDE/o8fuco.h:7: warning: unused variable `o8nr' INCLUDE/o8fuco.h:7: warning: unused variable `o8nres' INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm' INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm' INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif' INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt' INCLUDE/o8fuco.h:15: warning: unused variable `o8te1' INCLUDE/o8fuco.h:15: warning: unused variable `o8singul' INCLUDE/o8fuco.h:16: warning: unused variable `o8ident' INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres' INCLUDE/o8fuco.h:16: warning: unused variable `o8cold' INCLUDE/o8fuco.h:18: warning: unused variable `o8icf' INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf' INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr' INCLUDE/o8fuco.h:18: warning: unused variable `o8cres' INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres' INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr' INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr' INCLUDE/o8fuco.h:25: warning: unused variable `o8nh' INCLUDE/o8fuco.h:25: warning: unused variable `o8ng' INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist' INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit' INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst' INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr' INCLUDE/o8comm.h:12: warning: unused variable `o8runtim' INCLUDE/o8comm.h:13: warning: unused variable `o8optite' INCLUDE/o8comm.h:14: warning: unused variable `o8accinf' INCLUDE/o8comm.h:15: warning: unused variable `o8itstep' INCLUDE/o8comm.h:15: warning: unused variable `o8phase' INCLUDE/o8comm.h:17: warning: unused variable `o8upsi' INCLUDE/o8comm.h:17: warning: unused variable `o8upsi0' INCLUDE/o8comm.h:17: warning: unused variable `o8upsi1' INCLUDE/o8comm.h:17: warning: unused variable `o8upsist' INCLUDE/o8comm.h:17: warning: unused variable `o8psi' INCLUDE/o8comm.h:17: warning: unused variable `o8psi0' INCLUDE/o8comm.h:18: warning: unused variable `o8psi1' INCLUDE/o8comm.h:18: warning: unused variable `o8psist' INCLUDE/o8comm.h:18: warning: unused variable `o8psimin' INCLUDE/o8comm.h:19: warning: unused variable `o8phi' INCLUDE/o8comm.h:19: warning: unused variable `o8phi0' INCLUDE/o8comm.h:19: warning: unused variable `o8phi1' INCLUDE/o8comm.h:19: warning: unused variable `o8phimin' INCLUDE/o8comm.h:19: warning: unused variable `o8fx' INCLUDE/o8comm.h:19: warning: unused variable `o8fx0' INCLUDE/o8comm.h:19: warning: unused variable `o8fx1' INCLUDE/o8comm.h:20: warning: unused variable `o8fxst' INCLUDE/o8comm.h:20: warning: unused variable `o8fmin' INCLUDE/o8comm.h:20: warning: unused variable `o8b2n' INCLUDE/o8comm.h:20: warning: unused variable `o8b2n0' INCLUDE/o8comm.h:20: warning: unused variable `o8xnorm' INCLUDE/o8comm.h:20: warning: unused variable `o8x0norm' INCLUDE/o8comm.h:20: warning: unused variable `o8sig0' INCLUDE/o8comm.h:20: warning: unused variable `o8dscal' INCLUDE/o8comm.h:20: warning: unused variable `o8dnorm' INCLUDE/o8comm.h:20: warning: unused variable `o8d0norm' INCLUDE/o8comm.h:21: warning: unused variable `o8sig' INCLUDE/o8comm.h:21: warning: unused variable `o8sigmin' INCLUDE/o8comm.h:21: warning: unused variable `o8dirder' INCLUDE/o8comm.h:21: warning: unused variable `o8cosphi' INCLUDE/o8comm.h:21: warning: unused variable `o8upsim' INCLUDE/o8comm.h:22: warning: unused variable `o8x0' INCLUDE/o8comm.h:22: warning: unused variable `o8x1' INCLUDE/o8comm.h:22: warning: unused variable `o8xmin' INCLUDE/o8comm.h:22: warning: unused variable `o8d' INCLUDE/o8comm.h:22: warning: unused variable `o8d0' INCLUDE/o8comm.h:23: warning: unused variable `o8dd' INCLUDE/o8comm.h:23: warning: unused variable `o8difx' INCLUDE/o8comm.h:23: warning: unused variable `o8resmin' INCLUDE/o8comm.h:25: warning: unused variable `o8gradf' INCLUDE/o8comm.h:25: warning: unused variable `o8gfn' INCLUDE/o8comm.h:25: warning: unused variable `o8qgf' INCLUDE/o8comm.h:25: warning: unused variable `o8gphi0' INCLUDE/o8comm.h:25: warning: unused variable `o8gphi1' INCLUDE/o8comm.h:26: warning: unused variable `o8gresn' INCLUDE/o8comm.h:28: warning: unused variable `o8perm' INCLUDE/o8comm.h:28: warning: unused variable `o8perm1' INCLUDE/o8comm.h:28: warning: unused variable `o8colno' INCLUDE/o8comm.h:28: warning: unused variable `o8rank' INCLUDE/o8comm.h:29: warning: unused variable `o8qr' INCLUDE/o8comm.h:29: warning: unused variable `o8betaq' INCLUDE/o8comm.h:29: warning: unused variable `o8diag' INCLUDE/o8comm.h:30: warning: unused variable `o8cscal' INCLUDE/o8comm.h:31: warning: unused variable `o8colle' INCLUDE/o8comm.h:35: warning: unused variable `o8a' INCLUDE/o8comm.h:35: warning: unused variable `o8scalm' INCLUDE/o8comm.h:35: warning: unused variable `o8scalm2' INCLUDE/o8comm.h:35: warning: unused variable `o8diag0' INCLUDE/o8comm.h:35: warning: unused variable `o8matsc' INCLUDE/o8comm.h:37: warning: unused variable `o8violis' INCLUDE/o8comm.h:37: warning: unused variable `o8alist' INCLUDE/o8comm.h:37: warning: unused variable `o8bind' INCLUDE/o8comm.h:38: warning: unused variable `o8bind0' INCLUDE/o8comm.h:38: warning: unused variable `o8aalist' INCLUDE/o8comm.h:38: warning: unused variable `o8clist' INCLUDE/o8comm.h:40: warning: unused variable `o8u' INCLUDE/o8comm.h:40: warning: unused variable `o8u0' INCLUDE/o8comm.h:41: warning: unused variable `o8w' INCLUDE/o8comm.h:41: warning: unused variable `o8w1' INCLUDE/o8comm.h:41: warning: unused variable `o8res' INCLUDE/o8comm.h:42: warning: unused variable `o8res0' INCLUDE/o8comm.h:42: warning: unused variable `o8res1' INCLUDE/o8comm.h:43: warning: unused variable `o8resst' INCLUDE/o8comm.h:43: warning: unused variable `o8scf' INCLUDE/o8comm.h:43: warning: unused variable `o8scf0' INCLUDE/o8comm.h:44: warning: unused variable `o8yu' INCLUDE/o8comm.h:44: warning: unused variable `o8slack' INCLUDE/o8comm.h:44: warning: unused variable `o8infeas' INCLUDE/o8comm.h:44: warning: unused variable `o8work' INCLUDE/o8comm.h:47: warning: unused variable `o8del' INCLUDE/o8comm.h:47: warning: unused variable `o8del01' INCLUDE/o8comm.h:47: warning: unused variable `o8delmin' INCLUDE/o8comm.h:47: warning: unused variable `o8ny' INCLUDE/o8comm.h:48: warning: unused variable `o8smalld' INCLUDE/o8comm.h:48: warning: unused variable `o8smallw' INCLUDE/o8comm.h:48: warning: unused variable `o8rho' INCLUDE/o8comm.h:48: warning: unused variable `o8rho1' INCLUDE/o8comm.h:48: warning: unused variable `o8eta' INCLUDE/o8comm.h:48: warning: unused variable `o8epsx' INCLUDE/o8comm.h:48: warning: unused variable `o8c1d' INCLUDE/o8comm.h:49: warning: unused variable `o8scfmax' INCLUDE/o8comm.h:49: warning: unused variable `o8updmy0' INCLUDE/o8comm.h:49: warning: unused variable `o8tauqp' INCLUDE/o8comm.h:49: warning: unused variable `o8taufac' INCLUDE/o8comm.h:49: warning: unused variable `o8taumax' INCLUDE/o8comm.h:51: warning: unused variable `o8alpha' INCLUDE/o8comm.h:51: warning: unused variable `o8beta' INCLUDE/o8comm.h:51: warning: unused variable `o8theta' INCLUDE/o8comm.h:51: warning: unused variable `o8sigsm' INCLUDE/o8comm.h:51: warning: unused variable `o8sigla' INCLUDE/o8comm.h:51: warning: unused variable `o8delta' INCLUDE/o8comm.h:51: warning: unused variable `o8stptrm' INCLUDE/o8comm.h:52: warning: unused variable `o8delta1' INCLUDE/o8comm.h:52: warning: unused variable `o8stmaxl' INCLUDE/o8comm.h:54: warning: unused variable `o8level' INCLUDE/o8comm.h:55: warning: unused variable `o8clow' INCLUDE/o8comm.h:55: warning: unused variable `o8lastdw' INCLUDE/o8comm.h:55: warning: unused variable `o8lastup' INCLUDE/o8comm.h:55: warning: unused variable `o8lastch' INCLUDE/o8comm.h:57: warning: unused variable `o8prou' INCLUDE/o8comm.h:57: warning: unused variable `o8meu' INCLUDE/o8comm.h:59: warning: unused variable `o8ug' INCLUDE/o8comm.h:59: warning: unused variable `o8og' INCLUDE/o8comm.h:65: warning: unused variable `o8xst' INCLUDE/o8comm.h:68: warning: unused variable `o8epsphi' optimize.c: In function `solchk': INCLUDE/o8fuco.h:5: warning: unused variable `o8val' INCLUDE/o8fuco.h:5: warning: unused variable `o8llow' INCLUDE/o8fuco.h:5: warning: unused variable `o8lup' INCLUDE/o8fuco.h:7: warning: unused variable `o8nr' INCLUDE/o8fuco.h:7: warning: unused variable `o8nres' INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm' INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm' INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif' INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt' INCLUDE/o8fuco.h:15: warning: unused variable `o8te1' INCLUDE/o8fuco.h:15: warning: unused variable `o8singul' INCLUDE/o8fuco.h:16: warning: unused variable `o8ident' INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres' INCLUDE/o8fuco.h:16: warning: unused variable `o8cold' INCLUDE/o8fuco.h:18: warning: unused variable `o8icf' INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf' INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr' INCLUDE/o8fuco.h:18: warning: unused variable `o8cres' INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres' INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr' INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr' INCLUDE/o8fuco.h:25: warning: unused variable `o8nh' INCLUDE/o8fuco.h:25: warning: unused variable `o8ng' INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist' INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit' INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst' INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr' INCLUDE/o8comm.h:12: warning: unused variable `o8runtim' INCLUDE/o8comm.h:14: warning: unused variable `o8accinf' INCLUDE/o8comm.h:15: warning: unused variable `o8phase' INCLUDE/o8comm.h:17: warning: unused variable `o8upsi' INCLUDE/o8comm.h:17: warning: unused variable `o8upsi0' INCLUDE/o8comm.h:17: warning: unused variable `o8upsi1' INCLUDE/o8comm.h:17: warning: unused variable `o8upsist' INCLUDE/o8comm.h:17: warning: unused variable `o8psi' INCLUDE/o8comm.h:17: warning: unused variable `o8psi0' INCLUDE/o8comm.h:18: warning: unused variable `o8psi1' INCLUDE/o8comm.h:18: warning: unused variable `o8psist' INCLUDE/o8comm.h:18: warning: unused variable `o8psimin' INCLUDE/o8comm.h:19: warning: unused variable `o8phi' INCLUDE/o8comm.h:19: warning: unused variable `o8phi0' INCLUDE/o8comm.h:19: warning: unused variable `o8phi1' INCLUDE/o8comm.h:19: warning: unused variable `o8phimin' INCLUDE/o8comm.h:19: warning: unused variable `o8fx0' INCLUDE/o8comm.h:19: warning: unused variable `o8fx1' INCLUDE/o8comm.h:20: warning: unused variable `o8fxst' INCLUDE/o8comm.h:20: warning: unused variable `o8fmin' INCLUDE/o8comm.h:20: warning: unused variable `o8b2n' INCLUDE/o8comm.h:20: warning: unused variable `o8b2n0' INCLUDE/o8comm.h:20: warning: unused variable `o8xnorm' INCLUDE/o8comm.h:20: warning: unused variable `o8x0norm' INCLUDE/o8comm.h:20: warning: unused variable `o8sig0' INCLUDE/o8comm.h:20: warning: unused variable `o8dscal' INCLUDE/o8comm.h:20: warning: unused variable `o8dnorm' INCLUDE/o8comm.h:20: warning: unused variable `o8d0norm' INCLUDE/o8comm.h:21: warning: unused variable `o8sig' INCLUDE/o8comm.h:21: warning: unused variable `o8sigmin' INCLUDE/o8comm.h:21: warning: unused variable `o8dirder' INCLUDE/o8comm.h:21: warning: unused variable `o8cosphi' INCLUDE/o8comm.h:21: warning: unused variable `o8upsim' INCLUDE/o8comm.h:22: warning: unused variable `o8x0' INCLUDE/o8comm.h:22: warning: unused variable `o8x1' INCLUDE/o8comm.h:22: warning: unused variable `o8xmin' INCLUDE/o8comm.h:22: warning: unused variable `o8d' INCLUDE/o8comm.h:22: warning: unused variable `o8d0' INCLUDE/o8comm.h:23: warning: unused variable `o8dd' INCLUDE/o8comm.h:23: warning: unused variable `o8difx' INCLUDE/o8comm.h:23: warning: unused variable `o8resmin' INCLUDE/o8comm.h:25: warning: unused variable `o8gradf' INCLUDE/o8comm.h:25: warning: unused variable `o8gfn' INCLUDE/o8comm.h:25: warning: unused variable `o8qgf' INCLUDE/o8comm.h:25: warning: unused variable `o8gphi0' INCLUDE/o8comm.h:25: warning: unused variable `o8gphi1' INCLUDE/o8comm.h:26: warning: unused variable `o8gresn' INCLUDE/o8comm.h:28: warning: unused variable `o8perm' INCLUDE/o8comm.h:28: warning: unused variable `o8perm1' INCLUDE/o8comm.h:28: warning: unused variable `o8colno' INCLUDE/o8comm.h:28: warning: unused variable `o8rank' INCLUDE/o8comm.h:29: warning: unused variable `o8qr' INCLUDE/o8comm.h:29: warning: unused variable `o8betaq' INCLUDE/o8comm.h:29: warning: unused variable `o8diag' INCLUDE/o8comm.h:30: warning: unused variable `o8cscal' INCLUDE/o8comm.h:31: warning: unused variable `o8colle' INCLUDE/o8comm.h:35: warning: unused variable `o8a' INCLUDE/o8comm.h:35: warning: unused variable `o8scalm' INCLUDE/o8comm.h:35: warning: unused variable `o8scalm2' INCLUDE/o8comm.h:35: warning: unused variable `o8diag0' INCLUDE/o8comm.h:35: warning: unused variable `o8matsc' INCLUDE/o8comm.h:37: warning: unused variable `o8violis' INCLUDE/o8comm.h:37: warning: unused variable `o8alist' INCLUDE/o8comm.h:37: warning: unused variable `o8bind' INCLUDE/o8comm.h:38: warning: unused variable `o8bind0' INCLUDE/o8comm.h:38: warning: unused variable `o8aalist' INCLUDE/o8comm.h:38: warning: unused variable `o8clist' INCLUDE/o8comm.h:40: warning: unused variable `o8u' INCLUDE/o8comm.h:40: warning: unused variable `o8u0' INCLUDE/o8comm.h:41: warning: unused variable `o8w' INCLUDE/o8comm.h:41: warning: unused variable `o8w1' INCLUDE/o8comm.h:41: warning: unused variable `o8res' INCLUDE/o8comm.h:42: warning: unused variable `o8res0' INCLUDE/o8comm.h:42: warning: unused variable `o8res1' INCLUDE/o8comm.h:43: warning: unused variable `o8resst' INCLUDE/o8comm.h:43: warning: unused variable `o8scf' INCLUDE/o8comm.h:43: warning: unused variable `o8scf0' INCLUDE/o8comm.h:44: warning: unused variable `o8yu' INCLUDE/o8comm.h:44: warning: unused variable `o8slack' INCLUDE/o8comm.h:44: warning: unused variable `o8infeas' INCLUDE/o8comm.h:44: warning: unused variable `o8work' INCLUDE/o8comm.h:47: warning: unused variable `o8del' INCLUDE/o8comm.h:47: warning: unused variable `o8del01' INCLUDE/o8comm.h:47: warning: unused variable `o8delmin' INCLUDE/o8comm.h:47: warning: unused variable `o8ny' INCLUDE/o8comm.h:48: warning: unused variable `o8smalld' INCLUDE/o8comm.h:48: warning: unused variable `o8smallw' INCLUDE/o8comm.h:48: warning: unused variable `o8rho' INCLUDE/o8comm.h:48: warning: unused variable `o8rho1' INCLUDE/o8comm.h:48: warning: unused variable `o8eta' INCLUDE/o8comm.h:48: warning: unused variable `o8epsx' INCLUDE/o8comm.h:48: warning: unused variable `o8c1d' INCLUDE/o8comm.h:49: warning: unused variable `o8scfmax' INCLUDE/o8comm.h:49: warning: unused variable `o8updmy0' INCLUDE/o8comm.h:49: warning: unused variable `o8tauqp' INCLUDE/o8comm.h:49: warning: unused variable `o8taufac' INCLUDE/o8comm.h:49: warning: unused variable `o8taumax' INCLUDE/o8comm.h:51: warning: unused variable `o8alpha' INCLUDE/o8comm.h:51: warning: unused variable `o8beta' INCLUDE/o8comm.h:51: warning: unused variable `o8theta' INCLUDE/o8comm.h:51: warning: unused variable `o8sigsm' INCLUDE/o8comm.h:51: warning: unused variable `o8sigla' INCLUDE/o8comm.h:51: warning: unused variable `o8delta' INCLUDE/o8comm.h:51: warning: unused variable `o8stptrm' INCLUDE/o8comm.h:52: warning: unused variable `o8delta1' INCLUDE/o8comm.h:52: warning: unused variable `o8stmaxl' INCLUDE/o8comm.h:54: warning: unused variable `o8level' INCLUDE/o8comm.h:55: warning: unused variable `o8clow' INCLUDE/o8comm.h:55: warning: unused variable `o8lastdw' INCLUDE/o8comm.h:55: warning: unused variable `o8lastup' INCLUDE/o8comm.h:55: warning: unused variable `o8lastch' INCLUDE/o8comm.h:57: warning: unused variable `o8prou' INCLUDE/o8comm.h:57: warning: unused variable `o8meu' INCLUDE/o8comm.h:59: warning: unused variable `o8ug' INCLUDE/o8comm.h:59: warning: unused variable `o8og' INCLUDE/o8comm.h:65: warning: unused variable `o8xst' INCLUDE/o8comm.h:68: warning: unused variable `o8epsphi' INCLUDE/o8cons.h:4: warning: unused variable `o8zero' INCLUDE/o8cons.h:4: warning: unused variable `o8one' INCLUDE/o8cons.h:4: warning: unused variable `o8two' INCLUDE/o8cons.h:4: warning: unused variable `o8three' INCLUDE/o8cons.h:4: warning: unused variable `o8four' INCLUDE/o8cons.h:5: warning: unused variable `o8five' INCLUDE/o8cons.h:5: warning: unused variable `o8six' INCLUDE/o8cons.h:5: warning: unused variable `o8seven' INCLUDE/o8cons.h:6: warning: unused variable `o8twom2' INCLUDE/o8cons.h:6: warning: unused variable `o8twop4' INCLUDE/o8cons.h:6: warning: unused variable `o8twop11' INCLUDE/o8cons.h:6: warning: unused variable `o8onep3' INCLUDE/o8cons.h:7: warning: unused variable `o8onep5' INCLUDE/o8cons.h:7: warning: unused variable `o8p2' INCLUDE/o8cons.h:7: warning: unused variable `o8p4' INCLUDE/o8cons.h:7: warning: unused variable `o8p5' INCLUDE/o8cons.h:7: warning: unused variable `o8p7' INCLUDE/o8cons.h:7: warning: unused variable `o8p8' INCLUDE/o8cons.h:7: warning: unused variable `o8p9' INCLUDE/o8cons.h:8: warning: unused variable `o8c45' INCLUDE/o8cons.h:8: warning: unused variable `o8tm12' INCLUDE/o8cons.h:9: warning: unused variable `o8tm10' INCLUDE/o8cons.h:9: warning: unused variable `o8tm9' INCLUDE/o8cons.h:9: warning: unused variable `o8tm8' INCLUDE/o8cons.h:9: warning: unused variable `o8tm7' INCLUDE/o8cons.h:9: warning: unused variable `o8tm6' INCLUDE/o8cons.h:9: warning: unused variable `o8tm5' INCLUDE/o8cons.h:10: warning: unused variable `o8tm4' INCLUDE/o8cons.h:10: warning: unused variable `o8tm3' INCLUDE/o8cons.h:10: warning: unused variable `o8tm2' INCLUDE/o8cons.h:10: warning: unused variable `o8tm1' INCLUDE/o8cons.h:10: warning: unused variable `o8tp1' INCLUDE/o8cons.h:10: warning: unused variable `o8tp2' INCLUDE/o8cons.h:11: warning: unused variable `o8tp3' INCLUDE/o8cons.h:11: warning: unused variable `o8tp4' optimize.c: In function `ef': INCLUDE/o8fuco.h:5: warning: unused variable `o8val' INCLUDE/o8fuco.h:5: warning: unused variable `o8llow' INCLUDE/o8fuco.h:5: warning: unused variable `o8lup' INCLUDE/o8fuco.h:7: warning: unused variable `o8nr' INCLUDE/o8fuco.h:7: warning: unused variable `o8nres' INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm' INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm' INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif' INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt' INCLUDE/o8fuco.h:15: warning: unused variable `o8te1' INCLUDE/o8fuco.h:15: warning: unused variable `o8singul' INCLUDE/o8fuco.h:16: warning: unused variable `o8ident' INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres' INCLUDE/o8fuco.h:16: warning: unused variable `o8cold' INCLUDE/o8fuco.h:18: warning: unused variable `o8icf' INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf' INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr' INCLUDE/o8fuco.h:18: warning: unused variable `o8cres' INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres' INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr' INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr' INCLUDE/o8fuco.h:25: warning: unused variable `o8nh' INCLUDE/o8fuco.h:25: warning: unused variable `o8ng' INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist' INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit' INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst' INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr' optimize.c: In function `egradf': INCLUDE/o8fuco.h:5: warning: unused variable `o8val' INCLUDE/o8fuco.h:5: warning: unused variable `o8llow' INCLUDE/o8fuco.h:5: warning: unused variable `o8lup' INCLUDE/o8fuco.h:7: warning: unused variable `o8nr' INCLUDE/o8fuco.h:7: warning: unused variable `o8nres' INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm' INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm' INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif' INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt' INCLUDE/o8fuco.h:15: warning: unused variable `o8te1' INCLUDE/o8fuco.h:15: warning: unused variable `o8singul' INCLUDE/o8fuco.h:16: warning: unused variable `o8ident' INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres' INCLUDE/o8fuco.h:16: warning: unused variable `o8cold' INCLUDE/o8fuco.h:18: warning: unused variable `o8icf' INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf' INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr' INCLUDE/o8fuco.h:18: warning: unused variable `o8cres' INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres' INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr' INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr' INCLUDE/o8fuco.h:25: warning: unused variable `o8nh' INCLUDE/o8fuco.h:25: warning: unused variable `o8ng' INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist' INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit' INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst' INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr' optimize.c: In function `econ': INCLUDE/o8fuco.h:5: warning: unused variable `o8val' INCLUDE/o8fuco.h:5: warning: unused variable `o8llow' INCLUDE/o8fuco.h:5: warning: unused variable `o8lup' INCLUDE/o8fuco.h:7: warning: unused variable `o8nr' INCLUDE/o8fuco.h:7: warning: unused variable `o8nres' INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm' INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm' INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif' INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt' INCLUDE/o8fuco.h:15: warning: unused variable `o8te1' INCLUDE/o8fuco.h:15: warning: unused variable `o8singul' INCLUDE/o8fuco.h:16: warning: unused variable `o8ident' INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres' INCLUDE/o8fuco.h:16: warning: unused variable `o8cold' INCLUDE/o8fuco.h:18: warning: unused variable `o8icf' INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf' INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr' INCLUDE/o8fuco.h:18: warning: unused variable `o8cres' INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres' INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr' INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr' INCLUDE/o8fuco.h:25: warning: unused variable `o8nh' INCLUDE/o8fuco.h:25: warning: unused variable `o8ng' INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist' INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit' INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst' INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr' optimize.c: In function `econgrad': INCLUDE/o8fuco.h:5: warning: unused variable `o8val' INCLUDE/o8fuco.h:5: warning: unused variable `o8llow' INCLUDE/o8fuco.h:5: warning: unused variable `o8lup' INCLUDE/o8fuco.h:7: warning: unused variable `o8nr' INCLUDE/o8fuco.h:7: warning: unused variable `o8nres' INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm' INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm' INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8deldif' INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt' INCLUDE/o8fuco.h:15: warning: unused variable `o8te1' INCLUDE/o8fuco.h:15: warning: unused variable `o8singul' INCLUDE/o8fuco.h:16: warning: unused variable `o8ident' INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres' INCLUDE/o8fuco.h:16: warning: unused variable `o8cold' INCLUDE/o8fuco.h:18: warning: unused variable `o8icf' INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf' INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr' INCLUDE/o8fuco.h:18: warning: unused variable `o8cres' INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres' INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr' INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr' INCLUDE/o8fuco.h:25: warning: unused variable `o8nh' INCLUDE/o8fuco.h:25: warning: unused variable `o8ng' INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist' INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit' INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst' INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr' gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c posterior.c -o posterior.o gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c precalc.c -o precalc.o gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c rio.c -o rio.o gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c theta.c -o theta.o gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c user_eval.c -o user_eval.o user_eval.c: In function `user_eval': INCLUDE/o8fuco.h:5: warning: unused variable `o8val' INCLUDE/o8fuco.h:5: warning: unused variable `o8llow' INCLUDE/o8fuco.h:5: warning: unused variable `o8lup' INCLUDE/o8fuco.h:7: warning: unused variable `o8nr' INCLUDE/o8fuco.h:7: warning: unused variable `o8nres' INCLUDE/o8fuco.h:7: warning: unused variable `o8nstep' INCLUDE/o8fuco.h:7: warning: unused variable `o8ndualm' INCLUDE/o8fuco.h:7: warning: unused variable `o8mdualm' INCLUDE/o8fuco.h:9: warning: unused variable `o8epsmac' INCLUDE/o8fuco.h:9: warning: unused variable `o8tolmac' INCLUDE/o8fuco.h:11: warning: unused variable `o8name' INCLUDE/o8fuco.h:13: warning: unused variable `o8epsdif' INCLUDE/o8fuco.h:15: warning: unused variable `o8intakt' INCLUDE/o8fuco.h:15: warning: unused variable `o8te0' INCLUDE/o8fuco.h:15: warning: unused variable `o8te1' INCLUDE/o8fuco.h:15: warning: unused variable `o8te2' INCLUDE/o8fuco.h:15: warning: unused variable `o8te3' INCLUDE/o8fuco.h:15: warning: unused variable `o8singul' INCLUDE/o8fuco.h:16: warning: unused variable `o8ident' INCLUDE/o8fuco.h:16: warning: unused variable `o8eqres' INCLUDE/o8fuco.h:16: warning: unused variable `o8silent' INCLUDE/o8fuco.h:16: warning: unused variable `o8cold' INCLUDE/o8fuco.h:18: warning: unused variable `o8icf' INCLUDE/o8fuco.h:18: warning: unused variable `o8icgf' INCLUDE/o8fuco.h:18: warning: unused variable `o8cfincr' INCLUDE/o8fuco.h:18: warning: unused variable `o8cres' INCLUDE/o8fuco.h:18: warning: unused variable `o8cgres' INCLUDE/o8fuco.h:20: warning: unused variable `o8ffuerr' INCLUDE/o8fuco.h:20: warning: unused variable `o8confuerr' INCLUDE/o8fuco.h:25: warning: unused variable `o8nh' INCLUDE/o8fuco.h:25: warning: unused variable `o8ng' INCLUDE/o8fuco.h:27: warning: unused variable `o8nonlinlist' INCLUDE/o8fuco.h:29: warning: unused variable `o8gunit' INCLUDE/o8fuco.h:31: warning: unused variable `o8gconst' INCLUDE/o8fuco.h:33: warning: unused variable `o8cfuerr' INCLUDE/o8fuco.h:38: warning: unused variable `o8numSinguls' INCLUDE/o8comm.h:12: warning: unused variable `o8runtim' INCLUDE/o8comm.h:13: warning: unused variable `o8optite' INCLUDE/o8comm.h:14: warning: unused variable `o8accinf' INCLUDE/o8comm.h:15: warning: unused variable `o8itstep' INCLUDE/o8comm.h:15: warning: unused variable `o8phase' INCLUDE/o8comm.h:17: warning: unused variable `o8upsi' INCLUDE/o8comm.h:17: warning: unused variable `o8upsi0' INCLUDE/o8comm.h:17: warning: unused variable `o8upsi1' INCLUDE/o8comm.h:17: warning: unused variable `o8upsist' INCLUDE/o8comm.h:17: warning: unused variable `o8psi' INCLUDE/o8comm.h:17: warning: unused variable `o8psi0' INCLUDE/o8comm.h:18: warning: unused variable `o8psi1' INCLUDE/o8comm.h:18: warning: unused variable `o8psist' INCLUDE/o8comm.h:18: warning: unused variable `o8psimin' INCLUDE/o8comm.h:19: warning: unused variable `o8phi' INCLUDE/o8comm.h:19: warning: unused variable `o8phi0' INCLUDE/o8comm.h:19: warning: unused variable `o8phi1' INCLUDE/o8comm.h:19: warning: unused variable `o8phimin' INCLUDE/o8comm.h:19: warning: unused variable `o8fx' INCLUDE/o8comm.h:19: warning: unused variable `o8fx0' INCLUDE/o8comm.h:19: warning: unused variable `o8fx1' INCLUDE/o8comm.h:20: warning: unused variable `o8fxst' INCLUDE/o8comm.h:20: warning: unused variable `o8fmin' INCLUDE/o8comm.h:20: warning: unused variable `o8b2n' INCLUDE/o8comm.h:20: warning: unused variable `o8b2n0' INCLUDE/o8comm.h:20: warning: unused variable `o8xnorm' INCLUDE/o8comm.h:20: warning: unused variable `o8x0norm' INCLUDE/o8comm.h:20: warning: unused variable `o8sig0' INCLUDE/o8comm.h:20: warning: unused variable `o8dscal' INCLUDE/o8comm.h:20: warning: unused variable `o8dnorm' INCLUDE/o8comm.h:20: warning: unused variable `o8d0norm' INCLUDE/o8comm.h:21: warning: unused variable `o8sig' INCLUDE/o8comm.h:21: warning: unused variable `o8sigmin' INCLUDE/o8comm.h:21: warning: unused variable `o8dirder' INCLUDE/o8comm.h:21: warning: unused variable `o8cosphi' INCLUDE/o8comm.h:21: warning: unused variable `o8upsim' INCLUDE/o8comm.h:22: warning: unused variable `o8x' INCLUDE/o8comm.h:22: warning: unused variable `o8x0' INCLUDE/o8comm.h:22: warning: unused variable `o8x1' INCLUDE/o8comm.h:22: warning: unused variable `o8xmin' INCLUDE/o8comm.h:22: warning: unused variable `o8d' INCLUDE/o8comm.h:22: warning: unused variable `o8d0' INCLUDE/o8comm.h:23: warning: unused variable `o8dd' INCLUDE/o8comm.h:23: warning: unused variable `o8difx' INCLUDE/o8comm.h:23: warning: unused variable `o8resmin' INCLUDE/o8comm.h:25: warning: unused variable `o8gradf' INCLUDE/o8comm.h:25: warning: unused variable `o8gfn' INCLUDE/o8comm.h:25: warning: unused variable `o8qgf' INCLUDE/o8comm.h:25: warning: unused variable `o8gphi0' INCLUDE/o8comm.h:25: warning: unused variable `o8gphi1' INCLUDE/o8comm.h:26: warning: unused variable `o8gres' INCLUDE/o8comm.h:26: warning: unused variable `o8gresn' INCLUDE/o8comm.h:28: warning: unused variable `o8perm' INCLUDE/o8comm.h:28: warning: unused variable `o8perm1' INCLUDE/o8comm.h:28: warning: unused variable `o8colno' INCLUDE/o8comm.h:28: warning: unused variable `o8rank' INCLUDE/o8comm.h:29: warning: unused variable `o8qr' INCLUDE/o8comm.h:29: warning: unused variable `o8betaq' INCLUDE/o8comm.h:29: warning: unused variable `o8diag' INCLUDE/o8comm.h:30: warning: unused variable `o8cscal' INCLUDE/o8comm.h:31: warning: unused variable `o8colle' INCLUDE/o8comm.h:35: warning: unused variable `o8a' INCLUDE/o8comm.h:35: warning: unused variable `o8scalm' INCLUDE/o8comm.h:35: warning: unused variable `o8scalm2' INCLUDE/o8comm.h:35: warning: unused variable `o8diag0' INCLUDE/o8comm.h:35: warning: unused variable `o8matsc' INCLUDE/o8comm.h:37: warning: unused variable `o8violis' INCLUDE/o8comm.h:37: warning: unused variable `o8alist' INCLUDE/o8comm.h:37: warning: unused variable `o8bind' INCLUDE/o8comm.h:38: warning: unused variable `o8bind0' INCLUDE/o8comm.h:38: warning: unused variable `o8aalist' INCLUDE/o8comm.h:38: warning: unused variable `o8clist' INCLUDE/o8comm.h:40: warning: unused variable `o8u' INCLUDE/o8comm.h:40: warning: unused variable `o8u0' INCLUDE/o8comm.h:41: warning: unused variable `o8w' INCLUDE/o8comm.h:41: warning: unused variable `o8w1' INCLUDE/o8comm.h:41: warning: unused variable `o8res' INCLUDE/o8comm.h:42: warning: unused variable `o8res0' INCLUDE/o8comm.h:42: warning: unused variable `o8res1' INCLUDE/o8comm.h:43: warning: unused variable `o8resst' INCLUDE/o8comm.h:43: warning: unused variable `o8scf' INCLUDE/o8comm.h:43: warning: unused variable `o8scf0' INCLUDE/o8comm.h:44: warning: unused variable `o8yu' INCLUDE/o8comm.h:44: warning: unused variable `o8slack' INCLUDE/o8comm.h:44: warning: unused variable `o8infeas' INCLUDE/o8comm.h:44: warning: unused variable `o8work' INCLUDE/o8comm.h:46: warning: unused variable `o8iterma' INCLUDE/o8comm.h:47: warning: unused variable `o8del' INCLUDE/o8comm.h:47: warning: unused variable `o8del0' INCLUDE/o8comm.h:47: warning: unused variable `o8del01' INCLUDE/o8comm.h:47: warning: unused variable `o8delmin' INCLUDE/o8comm.h:47: warning: unused variable `o8tau0' INCLUDE/o8comm.h:47: warning: unused variable `o8tau' INCLUDE/o8comm.h:47: warning: unused variable `o8ny' INCLUDE/o8comm.h:48: warning: unused variable `o8smalld' INCLUDE/o8comm.h:48: warning: unused variable `o8smallw' INCLUDE/o8comm.h:48: warning: unused variable `o8rho' INCLUDE/o8comm.h:48: warning: unused variable `o8rho1' INCLUDE/o8comm.h:48: warning: unused variable `o8eta' INCLUDE/o8comm.h:48: warning: unused variable `o8epsx' INCLUDE/o8comm.h:48: warning: unused variable `o8c1d' INCLUDE/o8comm.h:49: warning: unused variable `o8scfmax' INCLUDE/o8comm.h:49: warning: unused variable `o8updmy0' INCLUDE/o8comm.h:49: warning: unused variable `o8tauqp' INCLUDE/o8comm.h:49: warning: unused variable `o8taufac' INCLUDE/o8comm.h:49: warning: unused variable `o8taumax' INCLUDE/o8comm.h:51: warning: unused variable `o8alpha' INCLUDE/o8comm.h:51: warning: unused variable `o8beta' INCLUDE/o8comm.h:51: warning: unused variable `o8theta' INCLUDE/o8comm.h:51: warning: unused variable `o8sigsm' INCLUDE/o8comm.h:51: warning: unused variable `o8sigla' INCLUDE/o8comm.h:51: warning: unused variable `o8delta' INCLUDE/o8comm.h:51: warning: unused variable `o8stptrm' INCLUDE/o8comm.h:52: warning: unused variable `o8delta1' INCLUDE/o8comm.h:52: warning: unused variable `o8stmaxl' INCLUDE/o8comm.h:54: warning: unused variable `o8level' INCLUDE/o8comm.h:55: warning: unused variable `o8clow' INCLUDE/o8comm.h:55: warning: unused variable `o8lastdw' INCLUDE/o8comm.h:55: warning: unused variable `o8lastup' INCLUDE/o8comm.h:55: warning: unused variable `o8lastch' INCLUDE/o8comm.h:57: warning: unused variable `o8prou' INCLUDE/o8comm.h:57: warning: unused variable `o8meu' INCLUDE/o8comm.h:59: warning: unused variable `o8ug' INCLUDE/o8comm.h:59: warning: unused variable `o8og' INCLUDE/o8comm.h:61: warning: unused variable `o8low' INCLUDE/o8comm.h:61: warning: unused variable `o8up' INCLUDE/o8comm.h:61: warning: unused variable `o8big' INCLUDE/o8comm.h:63: warning: unused variable `o8nreset' INCLUDE/o8comm.h:65: warning: unused variable `o8xst' INCLUDE/o8comm.h:68: warning: unused variable `o8epsphi' INCLUDE/o8fint.h:23: warning: unused variable `o8bloc' INCLUDE/o8fint.h:23: warning: unused variable `o8corr' INCLUDE/o8cons.h:4: warning: unused variable `o8two' INCLUDE/o8cons.h:5: warning: unused variable `o8five' INCLUDE/o8cons.h:5: warning: unused variable `o8six' INCLUDE/o8cons.h:6: warning: unused variable `o8twom2' INCLUDE/o8cons.h:6: warning: unused variable `o8twop4' INCLUDE/o8cons.h:6: warning: unused variable `o8twop11' INCLUDE/o8cons.h:6: warning: unused variable `o8onep3' INCLUDE/o8cons.h:7: warning: unused variable `o8onep5' INCLUDE/o8cons.h:7: warning: unused variable `o8p2' INCLUDE/o8cons.h:7: warning: unused variable `o8p5' INCLUDE/o8cons.h:7: warning: unused variable `o8p7' INCLUDE/o8cons.h:7: warning: unused variable `o8p8' INCLUDE/o8cons.h:7: warning: unused variable `o8p9' INCLUDE/o8cons.h:8: warning: unused variable `o8tm12' INCLUDE/o8cons.h:9: warning: unused variable `o8tm10' INCLUDE/o8cons.h:9: warning: unused variable `o8tm9' INCLUDE/o8cons.h:9: warning: unused variable `o8tm8' INCLUDE/o8cons.h:9: warning: unused variable `o8tm7' INCLUDE/o8cons.h:9: warning: unused variable `o8tm6' INCLUDE/o8cons.h:9: warning: unused variable `o8tm5' INCLUDE/o8cons.h:10: warning: unused variable `o8tm4' INCLUDE/o8cons.h:10: warning: unused variable `o8tm3' INCLUDE/o8cons.h:10: warning: unused variable `o8tp1' INCLUDE/o8cons.h:10: warning: unused variable `o8tp2' INCLUDE/o8cons.h:11: warning: unused variable `o8tp3' INCLUDE/o8cons.h:11: warning: unused variable `o8tp4' gcc -IINCLUDE -Id:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -std=gnu99 -c xml.c -o xml.o windres -I d:/biocbld/bbs-2.1-bioc/R/include -i cosmo_res.rc -o cosmo_res.o gcc -shared -s -o cosmo.dll cosmo.def alloc.o back.o constraints.o cosmo.o cregistration.o donlp2.o estarts.o eval.o fit.o free.o init.o io.o lstarts.o matLib.o newx.o optimize.o posterior.o precalc.o rio.o theta.o user_eval.o xml.o cosmo_res.o -Ld:/biocbld/bbs-2.1-bioc/R/bin -lR ... DLL made installing DLL installing R files installing inst files installing data files installing man source files installing indices not zipping data installing help >>> Building/Updating help pages for package 'cosmo' Formats: text html latex example chm addCon text html latex example chm align-class text html latex example chm bfile2tmat text html latex example chm bgModel text html latex example chm boundCon-class text html latex example chm constraintSet-class text html latex example chm cosmo-class text html latex example chm cosmo text html latex example chm intInfo-class text html latex example chm license.cosmo text html latex example chm makeBoundCon text html latex example chm makeConSet text html latex example chm makePalCon text html latex example chm makePosFreqCon text html latex example chm makeShapeCon text html latex example chm makeShapeDiffCon text html latex example chm makeSubMotifCon text html latex example chm motifPWM text html latex example chm palCon-class text html latex example chm posFreqCon-class text html latex example chm postProbs-class text html latex example chm readConFile text html latex example chm rseq text html latex example chm shapeCon-class text html latex example chm shapeDiffCon-class text html latex example chm simScore text html latex example chm subMotifCon-class text html latex example chm transMats text html latex example chm writeConFile text html latex example chm Microsoft HTML Help Compiler 4.74.8702 Compiling d:\biocbld\bbs-2.1-bioc\meat\cosmo.Rcheck\00_pkg_src\cosmo\chm\cosmo.chm Compile time: 0 minutes, 0 seconds 30 Topics 179 Local links 0 Internet links 1 Graphic Created d:\biocbld\bbs-2.1-bioc\meat\cosmo.Rcheck\00_pkg_src\cosmo\chm\cosmo.chm, 52,974 bytes Compression decreased file by 61,667 bytes. preparing package cosmo for lazy loading Loading required package: seqLogo Loading required package: grid adding MD5 sums * DONE (cosmo)