Back to Multiple platform build/check report
| Package: snapCGH |
| Version: 1.0.0 |
| Command: D:\biocbld\R-2.3.0\bin\R.exe CMD build snapCGH |
| RetCode: 0 |
| Time: 44.5 seconds |
| Status: OK |
| PackageFile: snapCGH_1.0.0.tar.gz |
* checking for file 'snapCGH/DESCRIPTION' ... OK
* preparing 'snapCGH':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
installing R.css in D:/biocbld/work-area/1.8d/tmpdir/Rinst438429302
---------- Making package snapCGH ------------
adding build stamp to DESCRIPTION
making DLL ...
making optimizer.d from optimizer.c
gcc -Id:/biocbld/R-2.3.0/include -Wall -O2 -c optimizer.c -o optimizer.o
windres --include-dir d:/biocbld/R-2.3.0/include -i snapCGH_res.rc -o snapCGH_res.o
gcc -shared -s -o snapCGH.dll snapCGH.def optimizer.o snapCGH_res.o -Ld:/biocbld/R-2.3.0/bin -lR
... DLL made
installing DLL
installing R files
installing inst files
installing data files
installing man source files
Warning messages:
1: incomplete final line found by readLines on './man/GEList.Rd'
2: incomplete final line found by readLines on './man/filter.Rd'
3: incomplete final line found by readLines on './man/find.param.four.Rd'
4: incomplete final line found by readLines on './man/find.param.two.Rd'
5: incomplete final line found by readLines on './man/fitBioHMM.Rd'
6: incomplete final line found by readLines on './man/removeByWeights.Rd'
7: incomplete final line found by readLines on './man/runDNAcopy.Rd'
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'snapCGH'
Formats: text html latex example chm
GEList text html latex chm
LargeDataObject text html latex example chm
SegList text html latex chm
Viterbi.five text html latex chm
Viterbi.four text html latex chm
Viterbi.three text html latex chm
Viterbi.two text html latex chm
cbind text html latex chm
chrominfo.Mb text html latex chm
computeSD text html latex chm
convert.output text html latex example chm
dim text html latex example chm
dimnames text html latex chm
filter text html latex chm
find.param.five text html latex chm
find.param.four text html latex chm
find.param.one text html latex chm
find.param.three text html latex chm
find.param.two text html latex chm
findAberrations text html latex chm
findAmplifications text html latex chm
findBreakPoints text html latex example chm
findGenomicEvents text html latex chm
findOutliers text html latex chm
findTranslocations text html latex chm
fit.model text html latex chm
fitBioHMM text html latex chm
fitHMM text html latex chm
fractionAltered text html latex chm
genomePlot text html latex example chm
heatmapGenome text html latex example chm
impute.lowess text html latex example chm
log2ratios text html latex chm
mergeStates text html latex chm
mod.chrominfo text html latex chm
non.zero.length.distr.non.tiled text html latex chm
non.zero.length.distr.tiled text html latex chm
plotGainLoss text html latex example chm
plotSegmentationStates text html latex example chm
plotSegmentedGenome text html latex example chm
plotSummaryProfile text html latex chm
processCGH text html latex chm
read.clonesinfo text html latex chm
removeByWeights text html latex chm
runDNAcopy text html latex chm
runGLAD text html latex chm
sim.structure text html latex example chm
subsetting text html latex example chm
summarize.clones text html latex chm
threshold.func text html latex example chm
zero.length.distr.non.tiled text html latex chm
zero.length.distr.tiled text html latex chm
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\work-area\1.8d\madman\Rpacks\snapCGH\chm\snapCGH.chm
Compile time: 0 minutes, 0 seconds
53 Topics
200 Local links
0 Internet links
1 Graphic
Created d:\biocbld\work-area\1.8d\madman\Rpacks\snapCGH\chm\snapCGH.chm, 78,505 bytes
Compression decreased file by 110,294 bytes.
preparing package snapCGH for lazy loading
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()' or start with 'help(Biobase)'. For details
on reading vignettes, see the openVignette help page.
adding MD5 sums
* DONE (snapCGH)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'snapCGH_1.0.0.tar.gz'