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| Package: maDB |
| Version: 1.4.0 |
| Command: D:\biocbld\R-2.3.0\bin\R.exe CMD INSTALL --build maDB_1.4.0.tar.gz |
| RetCode: 1 |
| Time: 20.0 seconds |
| Status: ERROR |
| PackageFile: None |
Using auto-selected zip options ' maDB-HELP=ziponly'
---------- Making package maDB ------------
adding build stamp to DESCRIPTION
installing R files
installing inst files
installing data files
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'maDB'
Formats: text html latex example chm
EexprSet-class text html latex example chm
Layout-class text html latex example chm
MAtoG text html latex example chm
MAtoR text html latex example chm
Sample-class text html latex example chm
SignalChannel-class text html latex example chm
Similarity-class text html latex chm
arrowProgress text html latex example chm
average text html latex chm
calculateSimilarity text html latex example chm
checkForAnnotation text html latex example chm
missing link(s): createDBTable
createDirs text html latex example chm
createEexprSetFromLimma text html latex example chm
createFile text html latex example chm
createJOINQuery text html latex example chm
createSampleFromTable text html latex example chm
dbCalculateRegulations text html latex chm
dbGetComparisons text html latex chm
dbGetGeneRegulationRanking text html latex chm
dbSearchSimilarPattern text html latex example chm
deleteExperimentFromDB text html latex chm
distance.euclidian text html latex example chm
distance.pearson text html latex example chm
distance.pearson.uncentered text html latex example chm
distance.spearman text html latex example chm
drawMAPlot text html latex chm
drawVolcanoPlot text html latex chm
format.latex text html latex example chm
getAnnotation text html latex chm
getDBAnnotation text html latex chm
getExpValue text html latex chm
getExperimentDBInfo text html latex chm
getMDB text html latex chm
getPK text html latex example chm
getPathFromFile text html latex example chm
getSamplesFromDB text html latex chm
isDecimal text html latex example chm
loadFromDB text html latex chm
mapply text html latex example chm
mean.center text html latex example chm
meanWithoutNA text html latex example chm
medianWithoutNA text html latex example chm
multiGrep text html latex example chm
myGrep text html latex example chm
plotSimilarity text html latex chm
progress text html latex example chm
publishToDB text html latex example chm
replaceAll text html latex example chm
replaces text html latex example chm
smallALL text html latex chm
toEexprSet text html latex chm
updateDBAnnotation text html latex chm
missing link(s): insertIntoTable updateDBTable
writeFigure text html latex example chm
writeLatexTable text html latex example chm
zipping help files
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\work-area\1.8d\madman\Rpacks\R.INSTALL\maDB\chm\maDB.chm
Compile time: 0 minutes, 0 seconds
55 Topics
256 Local links
0 Internet links
1 Graphic
Created d:\biocbld\work-area\1.8d\madman\Rpacks\R.INSTALL\maDB\chm\maDB.chm, 77,693 bytes
Compression decreased file by 115,048 bytes.
preparing package maDB for lazy loading
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()' or start with 'help(Biobase)'. For details
on reading vignettes, see the openVignette help page.
Error: package 'pgUtils' required by 'maDB' could not be found
Execution halted
make: *** [lazyload] Error 1
*** Installation of maDB failed ***
Removing 'D:/biocbld/R-2.3.0/library/maDB'