eoPredData

This is the released version of eoPredData; for the devel version, see eoPredData.

ExperimentHub package containing model data for predicting preeclampsia status for based on plcaental DNA methylation profile

Bioconductor version: Release (3.21)

Provides access to eoPred pretrained model hosted on ExperimentHub. Model was trained on placental DNA methylation preeclampsia samples using mixOmics splsda. There are two resources: 1. the model object, and 2. a testing data set used to demonstrate the function.

Author: Iciar Boyano [aut], Victor Yuan [aut, cre]

Maintainer: Victor Yuan <victor.2wy at gmail.com>

Citation (from within R, enter citation("eoPredData")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("eoPredData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("eoPredData")

eoPredData	HTML	R Script
Reference Manual	PDF
LICENSE	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	ExperimentData, ExperimentHub, GEO, Homo_sapiens_Data, MethylationArrayData, Tissue
Version	1.2.0
License	MIT + file LICENSE
Depends	ExperimentHub
Imports
System Requirements
URL	https://github.com/wvictor14/eoPredData
Bug Reports	https://github.com/wvictor14/eoPredData/issues

Suggests	BiocStyle, knitr, rmarkdown, RefManageR, planet, mixOmics
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	eoPredData_1.2.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/eoPredData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/eoPredData
Package Short Url	https://bioconductor.org/packages/eoPredData/
Package Downloads Report	Download Stats