Changes in version 1.15.13                       

  - Add separate environment (untested) for Linux Aarch64. Cannot break
    that platform more than it already is.

                       Changes in version 1.15.12                       

  - Update Conda environment for Linux to avoid Anaconda channel.

                       Changes in version 1.15.11                       

  - Re-enable plotVelocityStream() with a warning.

                       Changes in version 1.15.10                       

  - Temporarily disable plotVelocityStream() due to unexplained issue
    related to metr::geom_streamline()

                       Changes in version 1.15.9                        

  - Update Conda environment for Linux and MacOSX Arm.
  - Patch GitHub Action to use GitHub version of remotes.

                       Changes in version 1.15.8                        

  - Update Conda environment using micromamba for MacOSX Arm.
  - Fix switch between MacOSX and MacOSX Arm environments.

                       Changes in version 1.15.7                        

  - Update Conda environment using micromamba for Windows.

                       Changes in version 1.15.6                        

  - Update Conda environment to use anaconda channel on Linux. Passed
    GitHub Action
    https://github.com/kevinrue/velociraptor/actions/runs/10612115572/job/29413105915.

                       Changes in version 1.15.5                        

  - Update Conda environment to svelo==0.3.2 on Linux.

                       Changes in version 1.15.4                        

  - Set scvelo version triggering deprecation error to 0.3.1.

                       Changes in version 1.15.3                        

  - Revert environment for Linux to the one of Bioconductor
    release 3.18.

                       Changes in version 1.15.2                        

  - Add environment for macOS (Intel); same environment as macos (M1).

                       Changes in version 1.15.1                        

  - Fix issue #63.
  - Update scvelo to 0.3.2 (conda-forge) for macOS (M1) and Linux.
  - Update scvelo to 0.2.5 (bioconda) for Windows.
  - Add mechanism to switch Conda environment (and scvelo version) based
    on operating system and architecture.
  - Use scanpy.pp.neighbors to calculate neighbors due to deprecation of
    automatic neighbor calculation in scvelo.pp.moments.
  - Update vignette to document the change of default value for
    n_neighbors from scvelo (30) to scanpy (15).

                       Changes in version 1.13.1                        

  - Robust fallback mechanism using basiliskRun option testload=.

                        Changes in version 1.9.3                        

  - Pin python version in conda environment.

                        Changes in version 1.9.2                        

  - Remove column names from reduced dimension matrix in gridVectors().

                        Changes in version 1.5.2                        

  - Remove column names of reduced dimension representation before
    velocity embedding.

                        Changes in version 1.5.1                        

  - Add example for scvelo.params argument.

                        Changes in version 1.3.1                        

  - Add typing_extensions to environment.

                        Changes in version 1.1.6                        

  - Move sanity check vignette to inst/.

                        Changes in version 1.1.5                        

  - Add Michael Stadler to package authors.

                        Changes in version 1.1.4                        

  - Fix typo in documentation.

                        Changes in version 1.1.3                        

  - Add vignette subdirectory with sanity checks.

                        Changes in version 1.1.2                        

  - Add functions plotVelocity and plotVelocityStream.

                        Changes in version 1.1.1                        

  - Refresh cached environments.

                        Changes in version 1.1.0                        

  - Bioconductor release 1.1.0.

                       Changes in version 0.99.9                        

  - Converted various functions to S4 generics for easier use with
    SingleCellExperiment objects.

                       Changes in version 0.99.8                        

  - Trigger new build to repeat ExperimentHub download.

                       Changes in version 0.99.7                        

  - Delete empty line to force cache update. See
    https://github.com/rubocop-hq/rubocop/pull/4342#issuecomment-305449759.

                       Changes in version 0.99.6                        

  - Set autoscale=FALSE in the call to scvelo function
    velocity_embedding to avoid issue related to Qt and plotting.

                       Changes in version 0.99.5                        

  - Trigger new build to check if Windows issue resolved itself.

                       Changes in version 0.99.4                        

  - Trigger new build to check whether TIMEOUT issue on Windows is
    reproducible.

                       Changes in version 0.99.3                        

  - Explicitly declare all Conda dependencies for scvelo.

                       Changes in version 0.99.2                        

  - Add hexsticker.

                       Changes in version 0.99.1                        

  - Remove .Rproj file from git repository.

                       Changes in version 0.99.0                        

  - First submission to Bioconductor.