Changes in version 0.99.9                        

We have been working on bug fixes and formatting/documentation changes
as requested during the Bioconductor review. See these requests here:
https://github.com/Bioconductor/Contributions/issues/2064

Breaking Changes

  - In the CpGsInfoAllRegions(), CpGsInfoOneRegion(), and
    GetCpGsInRegion() functions, note that we have added a new argument
    region_gr (in the second position) which allows for the input of a
    GRanges object to these functions. This will cause errors in
    existing code if that code uses positional argument matching. Any
    existing code that matches arguments by name will be unaffected.

                       Changes in version 0.99.2                        

Major Changes

Bolstered documentation across all package help / manual files

Bug Fixes

                       Changes in version 0.99.1                        

Migrated all clean files to this repository. All development history in
https://github.com/TransBioInfoLab/coMethDMR_old

                     Changes in version 0.0.0.9001                      

Major Changes

Included EPIC arrays annotation (#1) Added a check that: (#5) The
rownames of the beta matrix are probe IDs, and There are only numeric
columns in the beta matrix

Bug Fixes