clusterStab

Compute cluster stability scores for microarray data


Bioconductor version: Release (3.19)

This package can be used to estimate the number of clusters in a set of microarray data, as well as test the stability of these clusters.

Author: James W. MacDonald, Debashis Ghosh, Mark Smolkin

Maintainer: James W. MacDonald <jmacdon at u.washington.edu>

Citation (from within R, enter citation("clusterStab")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("clusterStab")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("clusterStab")
clusterStab Overview PDF R Script
Reference Manual PDF

Details

biocViews Clustering, Software
Version 1.76.0
In Bioconductor since BioC 1.7 (R-2.2) (19 years)
License Artistic-2.0
Depends Biobase(>= 1.4.22), R (>= 1.9.0), methods
Imports
System Requirements
URL
See More
Suggests fibroEset, genefilter
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package clusterStab_1.76.0.tar.gz
Windows Binary clusterStab_1.76.0.zip
macOS Binary (x86_64) clusterStab_1.76.0.tgz
macOS Binary (arm64) clusterStab_1.76.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/clusterStab
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/clusterStab
Bioc Package Browser https://code.bioconductor.org/browse/clusterStab/
Package Short Url https://bioconductor.org/packages/clusterStab/
Package Downloads Report Download Stats