bhuvad_theme            Custom theme
characteriseGeneset     Functionally characterise a list of genes
computeMsigNetwork      Compute a network using computed gene set
                        overlap
computeMsigOverlap      Compute gene set overlap
computeMsigWordFreq     Compute word frequencies for a single MSigDB
                        collection
findMsigClusters        Identify gene-set clusters from a gene-set
                        overlap network
getMsigExclusionList    Exclusion list of words for MSigDB gene set
                        text mining
hgsc                    The Hallmark collection from the MSigDB
plotGeneStats           Plot gene statistics for clusters of gene sets
plotMsigNetwork         Plot a gene set overlap network
plotMsigPPI             Plot PPI network for gene-set clusters
                        identified using vissE
plotMsigWordcloud       Compute and plot word frequencies for multiple
                        MSigDB collections
