Ribo-class              Ribo Class
get_coverage            Retrieves the coverage data for a given
                        transcript
get_experiments         Provides a list of experiments from a .ribo
                        file
get_info                Get information about the .ribo file
get_internal_region_coordinates
                        Retrieves the region stop and start coordinates
get_internal_region_lengths
                        Returns the overall length of each region with
                        UTR Junctions
get_length_distribution
                        Retrieves the length distribution of a given
                        region
get_metadata            Retrieves the metadata of an experiment
get_metagene            Retrieves the metagene data from a .ribo file
get_original_region_coordinates
                        Retrieves the region stop and start coordinates
get_original_region_lengths
                        Returns the overall length of each region
get_reference_names     Retrieves a list of reference names
get_region_coordinates
                        Retrieves the region stop and start coordinates
get_region_counts       Retrieves the region counts from a .ribo file
get_region_lengths      Returns the overall length of each region with
                        UTR Junctions
get_rnaseq              Information on the RNA-Seq data of the
                        experiments, if any
get_tidy_metagene       Retrieves the metagene data in a tidy format
plot_length_distribution
                        Plots the length distribution
plot_metagene           Plots the metagene coverage data
plot_region_counts      Plots the region counts of UTR5, CDS, and UTR3
rename_default          Rename function for appris transcriptome naming
                        convention
rename_transcripts      Renames the transcripts
ribor                   ribor: A package for reading .ribo files
set_aliases             Set the aliases of a ribo object
