af894e55adb8bee085ec9ec649b7963a *DESCRIPTION
412e476326a4c6d98e3932122c9d834e *INDEX
831e0fefd5419228a199c4ebd42270e6 *LICENSE
cb2a855b0137d0b5ef991df4ae23a640 *Meta/Rd.rds
86d0636b4c700e416386835098fcba6f *Meta/features.rds
2243c07ac19ec20e20158ffe83991caa *Meta/hsearch.rds
d36fb9cf25b61bcd4e05194292014531 *Meta/links.rds
fcf9a638f5f9651d26f54cbc95516b9e *Meta/nsInfo.rds
8e2bddb17b0f10c3cf5509fd594a6c63 *Meta/package.rds
7053f3292f34391d5ed86533483529fa *Meta/vignette.rds
6d7b06974e9a3c22efe09dda729e0528 *NAMESPACE
ff639b58856b6e7d3ac28b367919dd6c *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/igvR
23cfbc7ae603b187e9d5746f68310456 *R/igvR.rdb
69577133cbb22d32ea8a6716ea0d1c5f *R/igvR.rdx
0d2734f9b2bf9cb6f4164af9231cdbbe *browserCode/dist/igvApp.html
8ec7d8b9c32b0e3e33d41aa87ac52bdc *browserCode/makefile
8ee2b352fdd0cce854d847d24de69866 *browserCode/src/igvApp.css
2139762f277ebb8b2319caf4eb0b7867 *browserCode/src/igvApp.js
7da500e31b4ec871b270f535977d0549 *browserCode/src/igvApp.pre
65e391d3d35538486b8d6ee4d7a8425c *demos/bamFile.R
58cbdf2943065658f2db219d39def818 *demos/bedgraph-svg-bug.R
5a58a0d6db952f2dc758762589b8e56d *demos/ctcfBamEtc.R
12908c9eb4710cdeac3c2a09cf00729f *demos/customGenome.R
6f3fa2c6d176f9ffc93a25062ad84244 *demos/demo.svg
a5d126a3631fa35362a104736df9b9f0 *demos/gwasDemo.R
f5252a77dd9db8483e3eaeb17f38f4e4 *demos/gwasUrlDemo.R
f819929060eaf6e851a961d168b939de *demos/methylationFromAnnotationHub.R
daaa056415421ad1273c553862665aec *demos/pairedEnd.R
9c95ca9fb1254318d7c87fb7539c1f16 *demos/quantitativeTrackDemo.R
47a026044a0a75e090346396a8699176 *demos/stockGenome.R
d722c6ce21fba14e820f3d54d70cc489 *demos/trackClickDemos.R
b4667f69161821e8150c1719e2a7ef28 *demos/ucscTableBrowser.R
6ab6b0d328b8a200680be40212b620bb *demos/vcfDemo.R
1a031a4487ec1f4ad477dafcdc53f3fa *doc/index.html
3de718ca1c384dc8d7ba3082ba83245e *doc/v00.basicIntro.R
d725136861751d037f80e18c206430ea *doc/v00.basicIntro.Rmd
4c15227a1cf3c009f6a79f89961c7acc *doc/v00.basicIntro.html
c7ca4397d7453af342539c97b4040008 *doc/v01.stockGenome.R
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e9b544ff9abfe1bcdacfd892ca52bc3c *doc/v02.customGenome.R
9eab05cb655a2b4f67e24dfe196f8989 *doc/v02.customGenome.Rmd
681092e430e7a95413fd3be514b93650 *doc/v02.customGenome.html
eeebe2cf6790cf02c1ca17223e8a3182 *doc/v03.ctcfChIP.R
961f4e5e6248b7c723926475ef570c31 *doc/v03.ctcfChIP.Rmd
941f3c373ae650013ce5b78c2178660e *doc/v03.ctcfChIP.html
9d0bb902f3f60711b7efd503aa96eac8 *doc/v04.pairedEnd.R
5835e25f5226a9534b98423d9d341af5 *doc/v04.pairedEnd.Rmd
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7b30e217b0681a9fe118ff727dd53c95 *doc/v05.ucscTableBrowser.R
0732b6b8d0abaf50f6fc9a8b9537e634 *doc/v05.ucscTableBrowser.Rmd
279bb5996baa882a447a509722ce530f *doc/v05.ucscTableBrowser.html
32c6b336f72b48be3af134f8506c3c65 *doc/v06.annotationHub.R
cab46c8e5e204c88d95e33a063001613 *doc/v06.annotationHub.Rmd
6f84f8e3e72f77a7de4d69b21c33b836 *doc/v06.annotationHub.html
90a7df277e5a55d0a855dc40bc6c13eb *doc/v07.gwas.R
8a49d6c3a6fd30f70d025d5f662e2ed8 *doc/v07.gwas.Rmd
94b3ee617ac579fd54882a7cbe5b9556 *doc/v07.gwas.html
a1baf4d70a828bfbe4589f1018be5d20 *extdata/GRCh38.94.NDUFS2.gff3
75a384c9304e32454306bb727814c343 *extdata/GSM749704_hg19_chr19_128M.bam
1a9a98b6678fca846a8144c4ae6ac80e *extdata/GSM749704_hg19_chr19_128M.bam.bai
c5bccec39d0caf9a071c182a11ac09fe *extdata/GSM749704_hg19_chr19_narrowPeaks_subset.RData
48c889aef7a6b60c75fc339f942f5f90 *extdata/GSM749704_hg19_chr19_peaks.narrowPeak
c5bccec39d0caf9a071c182a11ac09fe *extdata/GSM749704_hg19_chr19_subset.RData
8bd47320586abca597f3432362e6a7a5 *extdata/carolin.gwas
2734a4c2cb89bf2666a0069c6c736c05 *extdata/ctcf-gata2/gata2-region-h3k4me3.bw
43a94471b2ae2498c0828747cec9c359 *extdata/ctcf-gata2/gata2-region-hg19.bam
0cd684dd9613d157738a2a3513511148 *extdata/ctcf-gata2/gata2-region-hg19.bam.bai
c5bccec39d0caf9a071c182a11ac09fe *extdata/ctcf-gata2/gata2-region-macs2-narrowPeaks.RData
36ee0ee64c50aa0807fb42ae47bcaf26 *extdata/gm12878_loops.bedpe.gz
26668d541c93305d85e7cfb60d6a3535 *extdata/gwas-3k-clean.RData
8e344e9497cc46bcb1e79a2c2549ab91 *extdata/gwas-5k.tsv
b6dc68b393cbb0277bda6a2f8bfbe155 *extdata/gwas/alzheimerSubsetOfGWASCatatalog-29apr2022.RData
8847b6f05760aa6a0917a89613c46f51 *extdata/gwas/ampad.eqtl.ndufs2.RData
88f68814e29c59193903309302102bb6 *extdata/gwas/bellenguez.bed
5d100f8455088ea98af9c03413f5f933 *extdata/gwas/bellenguez.gwas
8bd47320586abca597f3432362e6a7a5 *extdata/gwas/carolin.gwas
2ccbeeea002db298787f7718692ff56c *extdata/gwas/deelan99.gwas
f3b310e4d2a64a9dfc64ce0e37d350e1 *extdata/k562-h3k4me3-gata2.tsv
1ee9095c3749ef58b78d8aebbf3ca5db *extdata/mef2c-4kb.vcf
8c392003503b8e6ff077b3fdf6d0c51b *extdata/mm10-sample.bw
861acb68c5cbe49323f856f11bf8994c *extdata/ndufs2-hg38.gff3
00e46344b23cb6b61a8e46130d49312f *extdata/psg1.bam
52b6f24558fbc9818f406395e7c7a87e *extdata/psg1.bam.bai
c013c37e4f1e7c1786bb3c82ab761cd9 *extdata/sarsGenome/README.txt
2b50465a864d11f01c986366db94662f *extdata/sarsGenome/Sars_cov_2.ASM985889v3.101.gff3
b98334cd0015ee1b1d2dc3b9d81b325e *extdata/sarsGenome/Sars_cov_2.ASM985889v3.dna.toplevel.fa
94a846eaeacd1dfd324b2a312f281d94 *extdata/sarsGenome/Sars_cov_2.ASM985889v3.dna.toplevel.fa.fai
8327ea48ae39508c789b2b05c93828ce *extdata/sixColumn-demo1.bedpe
02172fd755a86ddfaaf02f1e67c22953 *extdata/tbl.mef2cGWAS.variants.RData
60bf5c74f07ef04082032b2de9bf57dc *extdata/tbl.with.MotifDbNames.Rdata
e6d4feceb4b466656e998b7ea69d2091 *extdata/tenColumn-demo2.bedpe
d4a76447211995522a8951918df56dc2 *extdata/tumor.bam
bf423a794aaaf141a94382acf964fb98 *extdata/tumor.bam.bai
d2ea93d354bbc9f7a22893eb1babe657 *help/AnIndex
9cbe83a358bcf5a38744e14a521eff4a *help/aliases.rds
8ac9302ed7a644bd0f4d03576a936160 *help/igvR.rdb
248494e664360a7ab28f6cb579fa8d86 *help/igvR.rdx
88765f9b1fda35352e8d204a728fb658 *help/paths.rds
a197763846dfc146b73595be09cfc592 *html/00Index.html
8b9362669af13540a86a3ac6cf22f99d *html/R.css
3722a9baa218c277002597b1e194f799 *unitTests/childrensDemo.R
8433df28eb9e345af8a985ab89594a46 *unitTests/igvR-vignette.R
0a9781997f1413b63cd2035e3c1fcd00 *unitTests/remoteAlignmentTrackDemo.R
27f421cb315e51a418dace433c2c468a *unitTests/test_Tracks.R
c7994aa091f2abd7b16efe6f1478b1d4 *unitTests/test_genomeSpec.R
37b464ec802e738c1817edf3f67266b8 *unitTests/test_igvR.R
bab2f1e7925badfec33dcced3ed3cf91 *unitTests/test_setCustomGenome.R
