$,PseudotimeOrdering-method	PseudotimeOrdering
$<-,PseudotimeOrdering-method	PseudotimeOrdering
averagePseudotime	averagePseudotime
cellData	PseudotimeOrdering
cellData<-	PseudotimeOrdering
cellData<-,PseudotimeOrdering-method	PseudotimeOrdering
cellnames	PseudotimeOrdering
cellnames<-	PseudotimeOrdering
cellnames<-,PseudotimeOrdering-method	PseudotimeOrdering
createClusterMST	createClusterMST
createClusterMST,ANY-method	createClusterMST
createClusterMST,SingleCellExperiment-method	createClusterMST
createClusterMST,SummarizedExperiment-method	createClusterMST
defineMSTPaths	defineMSTPaths
guessMSTRoots	guessMSTRoots
ncells	PseudotimeOrdering
npaths	PseudotimeOrdering
pathData	PseudotimeOrdering
pathData<-	PseudotimeOrdering
pathData<-,PseudotimeOrdering-method	PseudotimeOrdering
pathnames	PseudotimeOrdering
pathnames<-	PseudotimeOrdering
pathnames<-,PseudotimeOrdering-method	PseudotimeOrdering
pathStat	PseudotimeOrdering
pathStat<-	PseudotimeOrdering
pathStat<-,PseudotimeOrdering-method	PseudotimeOrdering
pathStatNames	PseudotimeOrdering
pathStatNames<-	PseudotimeOrdering
pathStatNames<-,PseudotimeOrdering-method	PseudotimeOrdering
pathStats	PseudotimeOrdering
pathStats<-	PseudotimeOrdering
pathStats<-,PseudotimeOrdering-method	PseudotimeOrdering
PseudotimeOrdering	PseudotimeOrdering
PseudotimeOrdering-class	PseudotimeOrdering
rowmean	rowmean
rowmedian	rowmean
show,PseudotimeOrdering-method	PseudotimeOrdering
splitByBranches	splitByBranches
