DECorrInputs            Generate all the input files for TEKRABber
                        downstream analysis
DEgeneTE                Estimate differentially expressed genes and TEs
TEKRABber               An R package estimates the correlations of
                        orthologs and transposable elements between two
                        species
appTEKRABber            appTEKRABber
corrOrthologTE          Estimate correlation comparing orthologs and
                        TEs
ctInputDE               Input expression data of gene/TE for
                        differentially expressed analysis within same
                        species
fetchDataHmChimp        Example output comparing human and chimpanzee
                        data using orhtologScale()
hg38_panTro6_rmsk       Repeatmasker track annotations with human and
                        chimpanzee
orthologScale           Normalized orthologous genes and TEs between
                        two species
prepareRMSK             Prepare a table from two species RepeatMakser
                        track from UCSC genome Table
rcpp_corr               Estimate the correlation between genes and
                        transposable elements
speciesCounts           Gene/TE expression data from human/chimpanzee
                        brain RNA-seq
