Package: TCseq
Type: Package
Title: Time course sequencing data analysis
Version: 1.34.0
Author: Mengjun Wu <minervajunjun@gmail.com>, Lei Gu
        <leigu@broadinstitute.org>
Maintainer: Mengjun Wu <minervajunjun@gmail.com>
Description: Quantitative and differential analysis of epigenomic and
        transcriptomic time course sequencing data, clustering analysis
        and visualization of the temporal patterns of time course data.
Depends: R (>= 3.4)
License: GPL (>= 2)
LazyData: TRUE
Imports: edgeR, BiocGenerics, reshape2, GenomicRanges, IRanges,
        SummarizedExperiment, GenomicAlignments, Rsamtools, e1071,
        cluster, ggplot2, grid, grDevices, stats, utils, methods,
        locfit
Suggests: testthat
biocViews: Epigenetics, TimeCourse, Sequencing, ChIPSeq, RNASeq,
        DifferentialExpression, Clustering, Visualization
RoxygenNote: 7.2.3
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:36:13 UTC
RemoteUrl: https://github.com/bioc/TCseq
RemoteRef: RELEASE_3_22
RemoteSha: 406875cced1aa5ee1c86528c48696241bdd136a1
NeedsCompilation: no
Packaged: 2025-11-11 18:00:47 UTC; root
Built: R 4.5.2; ; 2025-11-11 18:08:13 UTC; windows
