Package Download_score TxDb.Scerevisiae.UCSC.sacCer3.sgdGene 86 TxDb.Rnorvegicus.UCSC.rn4.ensGene 306 org.Rn.eg.db 1712 moe430a.db 40 pd.mapping50k.hind240 168 hcg110cdf 21 xlaevis2probe 18 hthgu133afrmavecs 18 hom.Hs.inp.db 18 lumiMouseAll.db 25 mgu74ccdf 21 BSgenome.Scerevisiae.UCSC.sacCer3 184 FDb.InfiniumMethylation.hg19 1460 TxDb.Celegans.UCSC.ce6.ensGene 295 pd.mapping50k.xba240 192 pd.tomato 26 xlaevis.db 25 gahgu95eprobe 7 gahgu95bcdf 6 org.Sco.eg.db 7 TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts 151 pd.hg.u95av2 58 rae230a.db 72 pd.vitis.vinifera 26 TxDb.Mmusculus.UCSC.mm9.knownGene 628 Rattus.norvegicus 62 RnAgilentDesign028282.db 29 mgu74bv2probe 21 medicagocdf 22 mouse430a2cdf 30 barley1cdf 23 mogene10sttranscriptcluster.db 82 rae230bcdf 23 pd.mg.u74bv2 25 human.db0 86 pd.hugene.1.0.st.v1 243 agprobe 23 mu19ksubacdf 21 bovineprobe 25 pd.2006.07.18.hg18.refseq.promoter 27 mgug4104a.db 23 BSgenome.Scerevisiae.UCSC.sacCer2 197 genomewidesnp5Crlmm 155 BSgenome.Drerio.UCSC.danRer7 297 ecolicdf 56 gahgu133bprobe 7 hguatlas13k.db 25 hugene10stv1probe 33 porcine.db 26 pd.porgene.1.1.st 26 illuminaHumanv2.db 65 TxDb.Hsapiens.UCSC.hg18.knownGene 558 drosgenome1cdf 22 BSgenome.Btaurus.UCSC.bosTau3 49 HuO22.db 24 hgu95b.db 28 BSgenome.Tgondii.ToxoDB.7.0 23 hgu219cdf 51 celeganscdf 24 pd.hg.u133a.2 45 moe430acdf 24 mouseCHRLOC 16 pd.canine.2 26 mu19ksubbcdf 20 xtropicalisprobe 21 chickenprobe 25 hthgu133a.db 86 BSgenome.Athaliana.TAIR.TAIR9 68 ragene20stprobeset.db 23 pd.aragene.1.1.st 37 mpedbarray.db 26 Mu22v3.db 24 BSgenome.Mmusculus.UCSC.mm8.masked 127 drosgenome1probe 24 pd.medicago 24 OperonHumanV3.db 25 pd.ecoli 26 hom.Ce.inp.db 9 pd.bovgene.1.0.st 35 pd.bovgene.1.1.st 97 pd.porgene.1.0.st 26 org.MeSH.Cal.SC5314.db 3 org.MeSH.Aga.PEST.db 3 BSgenome.Mmusculus.UCSC.mm9.masked 42 org.MeSH.Dgr.db 4 org.MeSH.Dsi.db 3 org.MeSH.Ddi.AX4.db 3 org.MeSH.Bsu.RONN1.db 3 org.MeSH.Ocu.db 3 org.MeSH.Sau.RF122.db 3 org.MeSH.Pfa.3D7.db 3 BSgenome.Drerio.UCSC.danRer7.masked 19 MeSH.db 12 org.MeSH.Tbr.9274.db 4 org.MeSH.Eco.APEC01.db 3 org.MeSH.Ana.db 4 org.MeSH.Eco.O157.H7.TW14359.db 3 org.MeSH.Eco.UMN026.db 3 org.MeSH.Pae.PAO1.db 3 lumiRatV1 1 SNPlocs.Hsapiens.dbSNP.20071016 2 mgu74av2 2 pd.guigene.1.1.st 36 SNPlocs.Hsapiens.dbSNP141.GRCh38 6 hs133phsentrezgcdf 1 hugene10st.db 1 pd.rcngene.1.0.st 22 pd.rjpgene.1.0.st 32 pd.soygene.1.0.st 31 lumiHumanV1 1 illuminaHumanv1 1 hs133bhsense7probe 1 hs133pptense7cdf 1 hs133bptense7probe 1 hsfocushsentrezgcdf 1 hsex10stv2ptensg7cdf 1 hs133phsenst7probe 1 hs133xptensg7cdf 1 gahgu133plus2 1 nugohs1a520180probe 20 ath1121501cdf 56 pd.ragene.1.0.st.v1 29 BSgenome.Hsapiens.UCSC.hg17 35 hgu219probe 22 org.Sc.sgd.db 604 hgu133plus2cdf 685 RmiR.Hs.miRNA 26 mgu74cv2.db 30 poplarcdf 23 SNPlocs.Hsapiens.dbSNP.20101109 14 drosgenome1.db 43 rtu34probe 22 targetscan.Hs.eg.db 163 canine2cdf 23 hu35ksubc.db 26 hu6800probe 23 mgu74bv2.db 26 mgu74bcdf 21 hgu133a2.db 263 ragene10stprobeset.db 26 IlluminaHumanMethylation450kmanifest 1267 hgu95bprobe 23 mirna102xgaincdf 21 paeg1acdf 22 hgu133atagprobe 38 rae230acdf 26 hugene11stprobeset.db 42 mogene20sttranscriptcluster.db 35 pd.moex.1.0.st.v1 43 human1mv1cCrlmm 26 hgu95cprobe 24 rtu34cdf 21 mogene10stprobeset.db 31 mgu74av2cdf 26 BSgenome.Osativa.MSU.MSU7 44 pd.hg.u95e 26 gahgu133aprobe 8 vitisviniferacdf 21 maizecdf 22 hthgu133acdf 32 IlluminaHumanMethylation27k.db 38 hgug4845a.db 20 anopheles.db0 29 pd.mogene.2.1.st 39 SNPlocs.Hsapiens.dbSNP.20111119 8 pd.hg.u133a 68 porcinecdf 22 htmg430aprobe 25 drosophila2cdf 29 u133aaofav2cdf 24 BSgenome.Dmelanogaster.UCSC.dm2.masked 20 pd.rcngene.1.1.st 25 ye6100subdcdf 21 pd.e.coli.2 30 pd.ovigene.1.0.st 26 illuminaMousev2.db 51 hgu133afrmavecs 54 RmiR.hsa 29 human650v3aCrlmm 25 bovine.db0 41 hom.At.inp.db 9 pd.zebgene.1.1.st 34 pd.hugene.1.1.st.v1 83 mirna10probe 22 hcg110.db 28 BSgenome.Mmusculus.UCSC.mm9 352 yeast2probe 23 pd.chicken 27 mu11ksuba.db 27 mgu74a.db 29 rgu34c.db 26 mgu74av2.db 36 hgu95c.db 27 rgu34a.db 32 pd.u133.x3p 37 pd.bsubtilis 27 bsubtiliscdf 22 mouse4302frmavecs 72 plasmodiumanophelescdf 40 pd.zebgene.1.0.st 25 hu35ksubccdf 21 pd.hg.u133a.tag 26 BSgenome.Gaculeatus.UCSC.gasAcu1 34 ye6100subccdf 21 ye6100subbcdf 21 r10kcod.db 25 HuExExonProbesetLocationHg19 21 org.Xl.eg.db 336 h10kcod.db 24 pd.cangene.1.0.st 36 hgu95bcdf 24 rhesus.db0 28 hom.Sc.inp.db 9 gahgu95av2.db 7 SIFT.Hsapiens.dbSNP132 73 FDb.FANTOM4.promoters.hg19 21 pd.mirna.3.1 25 BSgenome.Rnorvegicus.UCSC.rn4.masked 27 rhesusprobe 23 rae230a 2 gahgu133bcdf 5 pedbarrayv10.db 26 BSgenome.Ggallus.UCSC.galGal3.masked 18 BSgenome.Mmulatta.UCSC.rheMac2.masked 19 BSgenome.Rnorvegicus.UCSC.rn5.masked 35 org.MeSH.Eco.K12.MG1655.db 3 org.MeSH.Eco.O157.H7.Sakai.db 3 org.MeSH.Eco.SE11.db 3 org.MeSH.Cel.db 4 org.MeSH.Lma.db 3 org.MeSH.Hsa.db 3 BSgenome.Gaculeatus.UCSC.gasAcu1.masked 18 BSgenome.Mfuro.UCSC.musFur1 20 BSgenome.Mmusculus.UCSC.mm10.masked 69 pd.rabgene.1.1.st 23 org.MeSH.Sau.M013.db 3 org.MeSH.Sau.USA300FPR3757.db 4 org.MeSH.Cja.db 4 org.MeSH.Sau.MRSA252.db 4 org.MeSH.Dvi.db 4 org.MeSH.Laf.db 3 org.MeSH.Sau.ED98.db 4 org.MeSH.Sau.N315.db 3 MafDb.ALL.wgs.phase1.release.v3.20101123 5 huex10stprobeset.db 23 pd.nugo.mm1a520177 23 pd.chogene.2.0.st 24 pd.chogene.2.1.st 23 pd.hta.2.0 86 mta10sttranscriptcluster.db 2 pd.drogene.1.0.st 32 hwgcod 2 pd.rusgene.1.0.st 23 hs133pptensg7cdf 1 hs133phsug7probe 1 hs95av2ptensg7cdf 1 hs95av2ptensg7probe 1 u133x3p 1 dmdrosophila2dmensg7probe 1 illuminaMousev1p1 1 hs133xhsense7probe 1 mouse4302 2 dmdrosophila2dmrefseq 1 gahgu95av2 1 gahgu133a 1 mm430mmense 2 hgu133acdf 237 BSgenome.Hsapiens.UCSC.hg19 2981 KEGG.db 265 org.Mm.eg.db 8180 plasmodiumanophelesprobe 22 pd.hg18.60mer.expr 46 pd.ragene.1.1.st.v1 37 BSgenome.Drerio.UCSC.danRer6 32 BSgenome.Dmelanogaster.UCSC.dm3 244 pd.soybean 28 gahgu133plus2cdf 8 pd.wheat 37 SNPlocs.Hsapiens.dbSNP.20100427 7 TxDb.Scerevisiae.UCSC.sacCer2.sgdGene 21 ygs98frmavecs 16 mouse4302cdf 132 hthgu133bprobe 23 canine2probe 22 mouse430a2frmavecs 17 org.Ag.eg.db 267 hu6800subacdf 21 hu35ksubaprobe 23 hu6800subdcdf 22 mgu74bv2cdf 22 mguatlas5k.db 24 hgu133b.db 46 BSgenome.Ptroglodytes.UCSC.panTro2 35 hgu133a2probe 31 mu19ksubccdf 22 mu11ksubbprobe 22 pd.zebrafish 26 hugene10stprobeset.db 37 org.Ce.eg.db 583 Roberts2005Annotation.db 24 hom.Dr.inp.db 8 pd.hg.u133.plus.2 261 pd.mouse430.2 47 citrusprobe 23 org.Tgondii.eg.db 7 gahgu133plus2probe 7 pd.hg.focus 30 yeast2.db 51 drosophila2probe 136 mu19ksuba.db 24 rnu34probe 22 hom.Rn.inp.db 10 mgug4121a.db 24 TxDb.Mmusculus.UCSC.mm10.knownGene 1413 oligoData 87 canine.db 27 hwgcod.db 26 pd.mouse430a.2 32 mogene21stprobeset.db 23 pd.drosgenome1 27 porcineprobe 24 pd.rhegene.1.1.st 34 canineprobe 24 pd.soygene.1.1.st 43 gahgu95bprobe 7 ath1121501probe 27 canine2.db 28 htmg430pmprobe 24 illuminaHumanv4.db 271 pd.plasmodium.anopheles 26 hugene20sttranscriptcluster.db 57 pd.cytogenetics.array 37 pd.mg.u74b 28 FDb.UCSC.snp137common.hg19 29 adme16cod.db 29 mgu74acdf 23 HsAgilentDesign026652.db 52 ragene10stv1cdf 23 BSgenome.Drerio.UCSC.danRer5 34 org.EcK12.eg.db 329 rnu34.db 27 pd.xenopus.laevis 26 pd.yg.s98 26 mirna20cdf 23 nugohs1a520180cdf 19 pd.ovigene.1.1.st 30 poplarprobe 23 pd.cyngene.1.0.st 25 pd.hc.g110 26 mu6500subacdf 21 pd.mg.u74c 27 IlluminaHumanMethylation27kmanifest 31 hom.Dm.inp.db 9 drosophila2.db 29 illuminaMousev1p1.db 30 pd.rg.u34b 24 pd.celegans 28 pd.hg.u95b 26 hu6800 2 hsahomology 2 rhesuscdf 24 BSgenome.Ptroglodytes.UCSC.panTro2.masked 18 org.MeSH.Atu.K84.db 3 org.MeSH.Cfa.db 3 org.MeSH.Eco.55989.db 3 org.MeSH.Gma.db 2 org.MeSH.Eco.SMS35.db 3 org.MeSH.Mmu.db 3 org.MeSH.Rno.db 3 org.MeSH.Miy.db 4 org.MeSH.Sau.COL.db 3 pd.guigene.1.0.st 24 MeSH.PCR.db 9 org.MeSH.Syn.db 3 org.MeSH.Ptr.db 3 TxDb.Hsapiens.UCSC.hg38.knownGene 2556 pd.elegene.1.0.st 23 MafDb.ESP6500SI.V2.SSA137.dbSNP138 4 phastCons100way.UCSC.hg19 227 TxDb.Athaliana.BioMart.plantsmart21 2 illuminaMousev2BeadID.db 3 gmahomology 2 illuminaRatv1BeadID.db 3 hgu133b 2 illuminaHumanv4BeadID.db 2 pd.chigene.1.1.st 37 pd.elegene.1.1.st 22 ChemmineDrugs 58 mogene10stv1.r3cdf 1 pd.rusgene.1.1.st 31 m20kcod 2 btahomology 2 ath1attair 1 gahgu95d 1 tomatocdf 20 hgu95av2.db 728 org.Dr.eg.db 955 IlluminaHumanMethylation450kanno.ilmn12.hg19 1458 bsubtilisprobe 23 hgu95dprobe 22 lumiMouseIDMapping 23 gahgu133a.db 8 ygs98.db 36 gahgu95cprobe 7 hugene11sttranscriptcluster.db 65 pd.mapping250k.nsp 161 huex.1.0.st.v2frmavecs 27 pd.rhesus 35 mogene20stprobeset.db 25 ratCHRLOC 17 mogene21sttranscriptcluster.db 36 tomatoprobe 22 hu6800subbcdf 22 hgug4112a.db 71 hgubeta7.db 25 h20kcod.db 26 wheatcdf 24 pd.drosophila.2 27 human370quadv3cCrlmm 26 HuExExonProbesetLocation 24 htmg430acdf 24 m20kcod.db 24 moe430bprobe 22 BSgenome.Celegans.UCSC.ce2 367 hgu133aprobe 146 bovinecdf 26 mu11ksubaprobe 22 hgu133a2frmavecs 20 pd.charm.hg18.example 27 mogene11sttranscriptcluster.db 32 pd.2006.07.18.mm8.refseq.promoter 26 ecoli2cdf 22 BSgenome.Dmelanogaster.UCSC.dm2 54 moe430bcdf 22 BSgenome.Cfamiliaris.UCSC.canFam2 35 hgfocuscdf 54 hthgu133b.db 25 hugene21stprobeset.db 32 worm.db0 28 soybeancdf 70 JazaeriMetaData.db 25 hu35ksubbprobe 23 BSgenome.Hsapiens.UCSC.hg18 249 pd.barley1 26 pd.rice 28 pd.hg.u133b 30 ecoliasv2probe 22 org.Bt.eg.db 503 rgu34b.db 26 org.Gg.eg.db 465 BSgenome.Rnorvegicus.UCSC.rn4 60 rgug4131a.db 23 hugene.1.0.st.v1frmavecs 19 htratfocusprobe 23 TxDb.Athaliana.BioMart.plantsmart16 4 pd.aragene.1.0.st 28 pd.pae.g1a 25 org.Cf.eg.db 485 pd.sugar.cane 25 pd.ht.mg.430a 31 pd.rjpgene.1.1.st 26 mu11ksubb.db 25 pd.rg.u34a 27 chimp.db0 37 hgu219.db 79 hgfocus.db 42 pd.hu6800 42 hgug4111a.db 25 ygs98cdf 25 BSgenome.Scerevisiae.UCSC.sacCer1 142 pd.ecoli.asv2 27 ragene20sttranscriptcluster.db 25 hi16cod.db 24 ragene21stprobeset.db 23 BSgenome.Btaurus.UCSC.bosTau6 83 gahgu133plus2.db 8 humancytosnp12v2p1hCrlmm 29 mogene.1.0.st.v1frmavecs 17 xlahomology 2 humanomni5quadv1bCrlmm 16 BSgenome.Mmulatta.UCSC.rheMac3.masked 22 org.MeSH.Bsu.168.db 3 org.MeSH.Bsu.TUB10.db 3 org.MeSH.Dda.3937.db 3 org.MeSH.Eco.536.db 3 org.MeSH.Cin.db 3 org.MeSH.Ani.FGSC.db 3 org.MeSH.Eco.E24377A.db 4 org.MeSH.Pae.PA14.db 3 BSgenome.Sscrofa.UCSC.susScr3 30 org.MeSH.Dya.db 3 SIFT.Hsapiens.dbSNP137 122 org.MeSH.Bta.db 4 MeSH.AOR.db 9 org.MeSH.Bsu.Bsn5.db 3 XtraSNPlocs.Hsapiens.dbSNP141.GRCh38 6 org.MeSH.Der.db 4 org.MeSH.Mml.db 3 org.MeSH.Eqc.db 3 org.MeSH.Cbr.db 4 org.MeSH.Mtr.db 3 illuminaMousev1p1BeadID.db 3 BSgenome.Hsapiens.NCBI.b36v3 1 domainsignatures 0 huex10sttranscriptcluster.db 39 raex10stprobeset.db 22 humanomni258v1aCrlmm 1 mta10stprobeset.db 2 mm74av1mmentrezgprobe 1 SNPlocs.Hsapiens.dbSNP.20080617 2 ragene10stv1.r3cdf 1 drosophila2 2 hs133av2hsentrezg 2 hs133bhsrefseq7cdf 1 hs133bptensg7cdf 1 hs133av2ptensg7cdf 1 hguatlas13k 2 cfcanine2cfense7cdf 1 hs133xhsrefseq7probe 1 yeast2 2 hs95av2hsentrezgcdf 1 pd.mg.u74cv2 27 rnu34cdf 22 GO.db 22435 IlluminaHumanMethylation450k.db 18 zebrafishprobe 22 genomewidesnp6Crlmm 166 hu6800.db 244 IlluminaHumanMethylation450kprobe 27 gahgu133b.db 7 nugohs1a520180.db 24 hgu95aprobe 25 hthgu133bcdf 22 mouse4302.db 214 pd.raex.1.0.st.v1 31 ath1121501.db 58 vitisviniferaprobe 23 Homo.sapiens 1134 hu35ksuba.db 26 hgu95av2 82 hugene10stv1cdf 109 pd.felgene.1.0.st 25 pd.mg.u74av2 31 TxDb.Athaliana.BioMart.plantsmart19 3 pd.hugene.2.0.st 92 pd.huex.1.0.st.v2 120 chicken.db0 31 barley1probe 22 nugomm1a520177.db 23 pd.hg.u219 41 rgu34bprobe 22 u133x3pprobe 22 humanCHRLOC 58 rgug4105a.db 24 maizeprobe 22 pd.yeast.2 27 zebrafish.db0 35 SNPlocs.Hsapiens.dbSNP.20110815 8 mu19ksubc.db 25 gahgu95d.db 6 pd.hugene.2.1.st 100 illuminaHumanWGDASLv3.db 24 paeg1aprobe 21 pd.bovine 29 cottonprobe 23 pd.citrus 27 rae230bprobe 23 org.Ss.eg.db 478 rgu34bcdf 22 mogene11stprobeset.db 28 LAPOINTE.db 25 u133x3pcdf 27 saureusprobe 22 xenopuslaeviscdf 21 gahgu95c.db 7 hthgu133aprobe 25 mwgcod.db 25 BSgenome.Drerio.UCSC.danRer6.masked 18 mgu74cv2cdf 22 mu6500subbcdf 22 hgu133bcdf 52 ecoli2.db 24 hgug4110b.db 30 u133x3p.db 31 BSgenome.Ggallus.UCSC.galGal3 108 mogene10stv1cdf 43 mu6500subdcdf 21 pd.moe430a 28 rtu34.db 25 primeviewprobe 26 ragene21sttranscriptcluster.db 23 hgu95e.db 27 BSgenome.Mmusculus.UCSC.mm8 131 pd.cyrgene.1.1.st 25 BSgenome.Ggallus.UCSC.galGal4 33 test2cdf 21 humanomni1quadv1bCrlmm 26 mu6500subccdf 21 hgu133a2cdf 100 sugarcaneprobe 21 BSgenome.Ptroglodytes.UCSC.panTro3 33 BSgenome.Btaurus.UCSC.bosTau4.masked 19 gahgu133acdf 6 BSgenome.Hsapiens.UCSC.hg17.masked 19 gahgu95ecdf 4 POCRCannotation.db 24 illuminaHumanWGDASLv4.db 31 org.MeSH.Aml.db 3 miRNAtap.db 105 org.MeSH.Ath.db 3 org.MeSH.Cpo.db 4 org.MeSH.Bsu.W23.db 3 org.MeSH.Eco.B.REL606.db 4 org.MeSH.Eco.IAI1.db 3 BSgenome.Sscrofa.UCSC.susScr3.masked 20 org.MeSH.Eco.CFT073.db 3 org.MeSH.Mes.db 3 org.MeSH.Nle.db 4 TxDb.Athaliana.BioMart.plantsmart22 145 BSgenome.Hsapiens.UCSC.hg19.masked 150 BSgenome.Dmelanogaster.UCSC.dm3.masked 20 BSgenome.Hsapiens.UCSC.hg18.masked 61 org.MeSH.Mdo.db 3 org.MeSH.Sau.VC40.db 3 org.MeSH.Spo.972h.db 3 org.MeSH.Sau.Mu3.db 3 org.MeSH.Pae.LESB58.db 4 org.MeSH.Sau.MSHR1132.db 4 org.MeSH.Ssc.db 3 org.MeSH.Xla.db 3 org.MeSH.Dse.db 3 org.MeSH.Pto.db 4 org.MeSH.Eco.IAI39.db 4 org.MeSH.Sau.Mu50.db 3 org.MeSH.Eco.BW2952.db 4 org.MeSH.Eco.O103.H2.12009.db 4 pd.mirna.4.0 35 humanLLMappings 2 KEGGprofile 0 hgu133plus2 2 pd.fingene.1.0.st 30 hs95av2hsense 1 hgu95a 2 hgu133a2 2 lumiHumanV2 1 Masks.Dmelanogaster.UCSC.dm3 2 TxDb.Scerevisiae.UCSC.sacCer2.ensGene 1 hs133bhsense7cdf 1 hvuhomology 2 hs133aptense7probe 1 cfcanine2cfensg7cdf 1 mgug4122a 2 gahgu133b 1 gahgu95c 1 hgu133plus2.db 1838 rat.db0 37 org.Hs.eg.db 18190 mouse430a2probe 25 TxDb.Athaliana.BioMart.plantsmart12 4 org.At.tair.db 771 illuminaHumanv1.db 67 lumiHumanIDMapping 76 mgu74cprobe 22 hgu133a.db 898 pd.mu11ksubb 27 cottoncdf 22 ecoli2probe 21 pd.ht.hg.u133a 35 hgu95dcdf 23 mirbase.db 236 pd.hg.u95d 26 moe430b.db 26 org.Hs.ipi.db 8 TxDb.Dmelanogaster.UCSC.dm3.ensGene 572 human1mduov3bCrlmm 25 IlluminaHumanMethylation450kannotation.ilmn.v1.2 2 lumiRatIDMapping 21 pd.feinberg.mm8.me.hx1 28 hu35ksubacdf 22 hu35ksubcprobe 23 hu35ksubdprobe 23 targetscan.Mm.eg.db 24 org.EcSakai.eg.db 209 pd.mirna.3.0 26 illuminaRatv1.db 30 org.Dm.eg.db 1190 mgu74cv2probe 24 arabidopsis.db0 36 hgu95ecdf 23 hgu95a.db 678 lumiHumanAll.db 94 hgug4101a.db 26 ragene11stprobeset.db 23 hs25kresogen.db 24 wheatprobe 23 moe430aprobe 24 Hs6UG171.db 24 htmg430pmcdf 26 Mus.musculus 415 pd.mogene.1.1.st.v1 30 caninecdf 23 sugarcanecdf 21 human660quadv1aCrlmm 17 mirna10cdf 36 xlaevis2cdf 20 pd.maize 26 pd.poplar 26 cyp450cdf 20 hugene21sttranscriptcluster.db 32 hgfocusprobe 49 rguatlas4k.db 23 hguqiagenv3.db 24 pd.rn.u34 25 ath1121501 2 rgu34aprobe 23 rae230b.db 26 ri16cod.db 24 chicken.db 28 chickencdf 23 BSgenome.Cfamiliaris.UCSC.canFam3 52 pd.mu11ksuba 25 org.Mmu.eg.db 500 BSgenome.Athaliana.TAIR.04232008 24 illuminaMousev1.db 32 htmg430bprobe 22 pd.s.aureus 28 gahgu95b.db 6 pd.x.tropicalis 25 mgu74b.db 27 pd.mirna.1.0 26 pd.rae230b 26 indac.db 24 ye6100subacdf 20 ecoliSakai.db0 27 human550v3bCrlmm 17 canine.db0 31 pd.canine 25 pd.ragene.2.1.st 29 BSgenome.Celegans.UCSC.ce10 61 pd.porcine 25 BSgenome.Cfamiliaris.UCSC.canFam2.masked 20 BSgenome.Ptroglodytes.UCSC.panTro3.masked 28 BSgenome.Drerio.UCSC.danRer5.masked 18 lumiRatAll.db 22 BSgenome.Dmelanogaster.FlyBase.r51 1 pd.hg.u95c 25 BSgenome.Hsapiens.NCBI.GRCh38 783 org.MeSH.Dpe.db 3 org.MeSH.Dre.db 3 org.MeSH.Eco.ED1a.db 4 org.MeSH.Eco.KO11FL.db 3 org.MeSH.Eco.O111.H.11128.db 3 org.MeSH.Mga.db 3 org.MeSH.Oan.db 4 org.MeSH.Sau.MSSA476.db 3 org.MeSH.Eco.S88.db 3 org.MeSH.Gga.db 3 org.MeSH.Sil.db 3 TxDb.Hsapiens.BioMart.igis 20 org.MeSH.Sau.Newman.db 4 org.MeSH.Cre.db 3 org.MeSH.Sco.A32.db 4 org.MeSH.Dme.db 3 org.MeSH.Xtr.db 3 org.MeSH.Eco.O127.H6.E2348.69.db 3 org.MeSH.Sce.S288c.db 3 BSgenome.Athaliana.TAIR.01222004 3 moex10sttranscriptcluster.db 24 KEGG 2 pd.margene.1.1.st 22 celegans 2 pd.drogene.1.1.st 22 hs133ahsensgcdf 1 atgenomeattigr7probe 1 hs133bptensg7probe 1 atgenomeattigr7cdf 1 dmgenome1dmrefseq7probe 1 hgu95e 2 TxDb.Mmusculus.BioMart.igis 0 illuminaMousev1 1 illuminaHumanv3ProbeID.db 1 rat2302 2 gahgu95b 1 hugene10sttranscriptcluster.db 577 Norway981.db 24 pd.ragene.2.0.st 28 MmAgilentDesign026655.db 28 BSgenome.Mmulatta.UCSC.rheMac2 35 hu6800cdf 25 MoExExonProbesetLocation 23 hgu133atagcdf 49 gahgu95ccdf 5 reactome.db 3393 SNPlocs.Hsapiens.dbSNP.20120608 17 gahgu95dcdf 5 FDb.InfiniumMethylation.hg18 64 rattoxfxcdf 19 mgu74av2probe 22 rwgcod.db 23 pd.081229.hg18.promoter.medip.hx1 25 mi16cod.db 24 mm24kresogen.db 21 medicagoprobe 22 mu19ksubb.db 25 cMAP 68 pd.mogene.1.0.st.v1 78 test3cdf 22 ag.db 29 zebrafish.db 28 soybeanprobe 22 hthgu133pluspmcdf 40 GGHumanMethCancerPanelv1.db 23 pd.mapping250k.sty 161 htrat230pmprobe 23 pd.genomewidesnp.6 186 mgug4120a.db 25 BSgenome.Alyrata.JGI.v1 22 ricecdf 28 BSgenome.Btaurus.UCSC.bosTau4 41 bovine.db 29 malaria.db0 28 celegans.db 44 pd.genomewidesnp.5 159 pd.2006.10.31.rn34.refseq.promoter 25 PartheenMetaData.db 24 BSgenome.Rnorvegicus.UCSC.rn5 147 gp53cdf 22 BSgenome.Amellifera.UCSC.apiMel2 32 ragene10stv1probe 21 gahgu95dprobe 8 BSgenome.Mmulatta.UCSC.rheMac3 34 ecoliasv2cdf 21 saureuscdf 23 htmg430bcdf 20 celegansprobe 24 humanomni25quadv1bCrlmm 17 hu35ksubd.db 26 pd.mg.u74a 29 ragene11sttranscriptcluster.db 26 hugene20stprobeset.db 31 mogene10stv1probe 24 BSgenome.Btaurus.UCSC.bosTau6.masked 70 pd.cotton 27 hu35ksubbcdf 22 SHDZ.db 23 xtropicaliscdf 21 pd.equgene.1.1.st 40 mu11ksubbcdf 21 rgu34ccdf 20 zebrafishcdf 24 yeast.db0 29 hgug4100a.db 27 hgu95d.db 28 pd.cangene.1.1.st 25 FDb.UCSC.snp135common.hg19 24 nugomm1a520177probe 21 pd.equgene.1.0.st 27 m10kcod.db 25 xenopus.db0 25 mouse430a2.db 62 GO 2 BSgenome.Tguttata.UCSC.taeGut1 28 org.MeSH.Eco.O157.H7.EDL933.db 4 org.MeSH.Dan.db 4 org.MeSH.Eco.O26.H11.11368.db 3 org.MeSH.Eco.UTI89.db 3 org.MeSH.Dmo.db 3 org.MeSH.Eco.K12.DH10B.db 4 org.MeSH.Eco.O157.H7.EC4115.db 4 org.MeSH.Osa.db 3 org.MeSH.Spu.db 3 org.MeSH.Pae.PA7.db 3 org.MeSH.Tgu.db 4 org.MeSH.Zma.db 3 BSgenome.Amellifera.UCSC.apiMel2.masked 19 org.MeSH.Bfl.db 3 BSgenome.Btaurus.UCSC.bosTau3.masked 19 org.MeSH.Ame.db 4 org.MeSH.Pab.db 4 Hspec 16 BSgenome.Cfamiliaris.UCSC.canFam3.masked 20 BSgenome.Dmelanogaster.UCSC.dm6 202 adme16cod 1 raex10sttranscriptcluster.db 23 humanomni258v1p1bCrlmm 2 pd.nugo.hs1a520180 25 pd.fingene.1.1.st 22 org.Rn.sp.db 2 illuminaHumanv3BeadID.db 2 hgfocus 2 hs133phsentrezg 1 hsex10stv2hsrefseq 1 org.Hs.sp.db 2 hs133pptense7probe 1 hs133phsrefseq7probe 1 mm74av1mmentrezgcdf 1 dmdrosophila2dmense7probe 1 dmdrosophila2dmenst7cdf 1 hs133xhsensg7probe 1 cfcanine2cfenst7cdf 1 mogene10st.db 1 lumiHumanIDMapping.db 1 h20kcod 2 gahgu95e 1 seqnames.db 5 RaExExonProbesetLocation 23 hgu95av2probe 262 TxDb.Mmusculus.UCSC.mm10.ensGene 115 ragene10sttranscriptcluster.db 27 fly.db0 40 hthgu133pluspmprobe 25 hgu133plus2frmavecs 41 mouse.db0 39 BSgenome.Ecoli.NCBI.20080805 221 mgu74c.db 26 rae230aprobe 64 mgug4122a.db 27 PFAM.db 734 TxDb.Hsapiens.UCSC.hg19.knownGene 4903 SNPlocs.Hsapiens.dbSNP.20090506 8 gahgu95e.db 7 mouse4302probe 28 human370v1cCrlmm 146 pd.hg.u95a 112 pd.feinberg.hg18.me.hx1 25 rat2302cdf 43 pd.x.laevis.2 25 rat2302.db 59 hcg110probe 21 hgu95av2cdf 352 hgu95eprobe 23 hgu95acdf 124 humanomniexpress12v1bCrlmm 23 BSgenome.Mmusculus.UCSC.mm10 1211 human610quadv1bCrlmm 47 Mu15v1.db 25 riceprobe 25 pd.mirna.2.0 28 pd.mogene.2.0.st 56 DO.db 1872 hgu133bprobe 26 pedbarrayv9.db 24 hgu95ccdf 23 hu35ksubdcdf 21 ygs98probe 23 TxDb.Athaliana.BioMart.plantsmart10 4 FDb.UCSC.tRNAs 150 BSgenome.Celegans.UCSC.ce6 26 rattoxfxprobe 20 ecoliK12.db0 28 pd.ag 27 citruscdf 23 rgu34cprobe 22 htratfocuscdf 22 hgu133plus2probe 124 hapmap370k 24 rat2302probe 26 pd.ht.hg.u133.plus.pm 37 yeast2cdf 24 gahgu95av2probe 7 hu6800subccdf 22 illuminaHumanv2BeadID.db 24 agcdf 24 test1cdf 20 hguDKFZ31.db 24 PANTHER.db 162 PolyPhen.Hsapiens.dbSNP131 130 test3probe 23 org.Pt.eg.db 312 pd.cyrgene.1.0.st 35 rgu34acdf 24 hu35ksubb.db 26 org.Pf.plasmo.db 68 ecoliprobe 23 TxDb.Rnorvegicus.UCSC.rn5.refGene 152 pd.rat230.2 45 rgug4130a.db 24 illuminaHumanv3.db 251 htrat230pmcdf 22 pig.db0 27 pd.moe430b 25 HuExExonProbesetLocationHg18 20 pd.rhegene.1.0.st 59 mgu74aprobe 21 nugomm1a520177cdf 19 pd.rg.u34c 25 TxDb.Athaliana.BioMart.plantsmart14 3 hom.Mm.inp.db 10 xenopuslaevisprobe 23 mu11ksubacdf 22 hivprtplus2cdf 21 primeviewcdf 61 mgu74bprobe 21 BSgenome.Amellifera.BeeBase.assembly4 26 pd.cyngene.1.1.st 36 pd.felgene.1.1.st 26 pd.ath1.121501 29 hugene10stv1.r3cdf 1 hgu133a 2 gahgu95av2cdf 6 pd.rae230a 27 org.MeSH.Aca.db 3 BSgenome.Tguttata.UCSC.taeGut1.masked 19 pd.rabgene.1.0.st 29 BSgenome.Ggallus.UCSC.galGal4.masked 19 org.MeSH.Tgo.ME49.db 3 BSgenome.Rnorvegicus.UCSC.rn6 123 org.MeSH.Sau.MW2.db 3 TxDb.Rnorvegicus.BioMart.igis 19 org.MeSH.Oni.db 3 org.MeSH.Eco.HS.db 3 org.MeSH.Eco.O26.H7.CB9615.db 4 org.MeSH.Sau.USA300TCH1516.db 3 org.MeSH.Vvi.db 4 athhomology 2 YEAST 2 illuminaHumanDASLBeadID.db 2 agahomology 2 ag 2 illuminaHumanv2 1 moex10stprobeset.db 23 hspeccdf 17 pd.chigene.1.0.st 21 rwgcod 2 illuminaHumanv1BeadID.db 4 illuminaMousev1BeadID.db 2 pd.margene.1.0.st 28 lumiMouseV1 1 hs133aptentrezgprobe 1 pd.medgene.1.0.st 30 pd.medgene.1.1.st 21 hs133ahsentrezg 1 hs133ahsentrezgcdf 1 hsex10stv2hsrefseqprobe 1 hs133phsentrezg7cdf 1 hs133bhsentrezg7probe 1 dmgenome1dmenst7probe 1 dmgenome1dmensg7cdf 1 mouse430a2 2 ath1atrefseq 1 MafDb.ESP6500SI.V2.SSA137 2 MeSH.Aca.eg.db 6 SNPlocs.Hsapiens.dbSNP142.GRCh37 8 MeSH.Sil.eg.db 4 MeSH.Ocu.eg.db 6 MeSH.Eco.IAI1.eg.db 2 MeSH.Mml.eg.db 5 MeSH.Pae.PAO1.eg.db 5 MeSH.Cbr.eg.db 5 BSgenome.Mfascicularis.NCBI.5.0 32 MeSH.Dan.eg.db 5 MeSH.Eco.ED1a.eg.db 4 MeSH.Dsi.eg.db 5 MeSH.Tgu.eg.db 5 MeSH.Eco.IAI39.eg.db 4 MeSH.Dre.eg.db 5 MeSH.Ath.eg.db 5 hgug4100a 2 MeSH.Sau.COL.eg.db 0 MeSH.Eco.O103.H2.12009.eg.db 0 MeSH.Sau.USA300FPR3757.eg.db 0 MeSH.Eco.KO11FL.eg.db 0 MeSH.Eco.O26.H7.CB9615.eg.db 0 MeSH.Eco.E24377A.eg.db 0 MeSH.Pae.LESB58.eg.db 0 rn230rnense7cdf 1 rn34arnensg7probe 1 rn230rnentrezg7cdf 1 rn230rnenst7cdf 1 rguatlas4k 2 rgu34c 2 r10kcod 2 BSgenome.Drerio.UCSC.danRer10 154 mm11ksubbmmenst7probe 1 mm11ksubbmmentrezg7probe 1 mm430bmmentrezg7cdf 1 mm74av1mmrefseq7probe 1 mm74av2mmenst7cdf 1 mmex10stv1mmrefseq7cdf 1 mmex10stv1mmrefseq7probe 1 atgenomeattigr 1 ath1attigrcdf 1 BSgenome.Dmelanogaster.BDGP.Release5 1 ggchickenggensg7cdf 1 egohomology 2 mouseLLMappings 2 hs133xhsenstprobe 2 hs133xhsentrezgprobe 1 hs133xptensgprobe 1 hs95av2hsenstcdf 1 hs95av2hsentrezg 1 hs95av2hsrefseqcdf 2 hs95av2hsug 1 hs95av2ptensg 1 hs95av2ptensgprobe 1 hs95av2ptenst 1 hs95av2ptenstprobe 2 hsex10stv2hsentrezg 1 hsex10stv2hsentrezgcdf 1 BSgenome.Mmusculus.UCSC.mm7 1 btbovinebtenst 1 btbovinebtenstprobe 1 cfahomology 2 cfcanine2cfensg 1 cfcanine2cfentrezgprobe 1 cfcanine2cfrefseqcdf 1 cfcanine2cfugcdf 1 cfcanine2cfugprobe 1 dmdrosophila2dmense 1 dmdrosophila2dmrefseqcdf 1 dmgenome1dmenst 1 dmgenome1dmugcdf 1 drzebrafishdrensgprobe 1 drzebrafishdrugcdf 1 drzebrafishdrugprobe 1 ggchickenggensgcdf 1 ggchickenggensgprobe 1 ggchickenggentrezg 1 ggchickenggentrezgprobe 1 ggchickenggug 1 hgu95c 2 hgu95d 2 hguDKFZ31 2 hi16cod 2 hs133ahsenstcdf 1 hs133ahsrefseqcdf 1 hs133aptentrezg 1 hs133av2hsenstprobe 2 hs133av2hsenseprobe 1 hs133av2hsentrezgcdf 1 hs133av2hsug 2 HsapiensGenome.hg16 1 hsex10stv2hsenst7cdf 1 hsex10stv2hsug7cdf 1 hsfocushsense7probe 1 hsfocushsrefseq7probe 1 indac 2 mm11ksubammentrezg 1 mm11ksubammrefseq 1 mm11ksubammrefseqprobe 1 mm11ksubammug 1 rn230arnrefseq 2 rn230brnentrezg 1 rn230brnentrezgprobe 1 rn230rnentrezg 2 rn230rnentrezgprobe 1 rn230rnugcdf 1 rn230rnugprobe 1 rn34arnenseprobe 1 rnex10stv1rnenstprobe 1 rnex10stv1rnentrezgprobe 1 dmgenome1dmense7cdf 1 dmgenome1dmug7cdf 1 drzebrafishdrense7probe 1 drzebrafishdrenst7cdf 1 hs133ahsenst7cdf 1 hs133ahsrefseq7probe 1 hs133ahsug7probe 1 hs133av2hsensg7probe 1 hs133av2hsenst7cdf 1 hs133phsenst7cdf 1 hs133pptensg7probe 1 hs133xhsense7cdf 1 hs133xhsenst7probe 1 hs133xhsentrezg7probe 1 hs133xhsug7probe 1 hs133xptensg7probe 1 hs95av2ptense7cdf 1 hs133av2ptenst 1 hs133bhsense 1 hs133bhsugprobe 1 hs133bptentrezg 2 hs133phsense 1 hs133phsrefseq 1 hs133pptensg 1 rnex10stv1rnug 1 mm430ammugcdf 1 int.mppi.db 1 sc.dbsubloc.db 2 org.Hs.ref.db 2 mm74cv2mmensecdf 1 mm430mmensecdf 1 hs133av2hsvegagcdf 1 hs133av2ptensgcdf 2 hs133av2ptrefseqcdf 1 hs133phsvegatcdf 1 pedbarrayv10 2 hs133xhsvegae 1 hs133xhsvegat 1 hs133xhsvegatprobe 1 hs95av2ptrefseqprobe 1 hsfocushsugcdf 2 hsfocusptrefseqprobe 1 mamurhesusmamuensecdf 1 mamurhesusmamuensgcdf 1 mamurhesusmamuenst 1 mm11ksubammvegatcdf 1 mm430a2mmugcdf 1 mm430ammensgprobe 1 mm430ammenst 2 mm430ammentrezg 1 mm430ammvegaecdf 1 mm430ammvegaeprobe 1 mm430bmmenseprobe 1 mm430bmmensgprobe 2 mm430bmmenst 1 mm430bmmug 1 mm430bmmvegagprobe 1 mm430mmensg 1 mm430mmenstprobe 2 mm430mmvegagprobe 1 mm74av1mmense 1 mm74av1mmrefseq 1 mm74av2mmrefseqprobe 1 mm74bv2mmensgcdf 1 mm74bv2mmrefseqprobe 1 mm74bv2mmug 2 mm74bv2mmugprobe 1 mm74cv2mmenst 1 mm74cv2mmentrezg 1 mm74cv2mmvegag 1 mm74cv2mmvegat 1 CelegansGenome.ce2 1 vvgrapevvtigrcdf 1 mm430a2mmenstprobe 1 MeSH.Eco.APEC01.eg.db 0 MafDb.ExAC.r0.3.sites 2 MeSH.Syn.eg.db 5 EnsDb.Rnorvegicus.v79 115 pd.rta.1.0 34 MeSH.Tbr.9274.eg.db 4 MeSH.Dda.3937.eg.db 5 MeSH.Spo.972h.eg.db 3 MeSH.Eqc.eg.db 4 MeSH.Eco.UMN026.eg.db 5 MeSH.Eco.K12.DH10B.eg.db 1 MeSH.Dvi.eg.db 5 MeSH.Laf.eg.db 5 MeSH.Pto.eg.db 5 MeSH.Pfa.3D7.eg.db 4 MeSH.Xla.eg.db 5 MeSH.Dse.eg.db 5 MeSH.Dmo.eg.db 5 SNPlocs.Hsapiens.dbSNP144.GRCh38 577 mm74av2mmensecdf 1 xtrhomology 1 ScerevisiaeGenome.sacCer1 1 rnex10stv1rnug7cdf 1 rnex10stv1rnense7probe 1 rn34arnenst7probe 1 rn230brnug7probe 1 rn230brnenst7cdf 1 rn230rnrefseq7probe 1 rn230arnrefseq7cdf 1 rn230brnrefseq7probe 1 rae230b 2 MafDb.ALL.wgs.phase3.release.v5b.20130502 2 phastCons100way.UCSC.hg38 131 drzebrafishdrenstprobe 1 mi16cod 2 hsfocushsense 2 rn230rnensecdf 1 hs133pptenseprobe 1 mm430mmrefseqcdf 1 mm11ksubammense7probe 1 mm11ksubammensg7cdf 1 mm11ksubbmmensg7cdf 1 mm11ksubbmmrefseq7probe 1 mm430ammenst7cdf 1 mm430ammrefseq7cdf 1 mm430bmmensg7probe 1 mm430mmensg7cdf 1 mm430mmentrezg7cdf 1 mm74av1mmenst7probe 1 mm74av1mmug7cdf 1 mm74av2mmense7cdf 1 mmex10stv1mmense7cdf 1 mmuhomology 2 atgenomeattigrprobe 1 ath1attigr 1 ggchickenggenst7probe 1 drzebrafishdrug7cdf 1 hgu95b 2 mwgcod 2 PFAM 2 hs95av2hsensg 2 hs95av2ptensgcdf 2 hs95av2ptenstcdf 1 hsex10stv2hsensecdf 1 hsex10stv2hsensg 1 hsex10stv2hsensgcdf 1 hsex10stv2hsugcdf 1 btbovinebtensg 1 btbovinebtrefseqcdf 1 btbovinebtrefseqprobe 1 cfcanine2cfense 1 cfcanine2cfenstprobe 1 cfcanine2cfentrezg 1 dmdrosophila2dmrefseqprobe 1 dmgenome1dmense 1 dmgenome1dmensg 1 drzebrafishdrentrezgprobe 1 ggchickenggenstcdf 1 hguqiagenv3 2 hs133ahsugprobe 1 hs133ahsvegaeprobe 1 hs133aptensgcdf 1 hs133av2hsense 2 hs133av2hsugprobe 1 hs133av2hsvegaeprobe 1 hsex10stv2hsense7cdf 1 hsex10stv2hsrefseq7cdf 1 hsfocushsensg7probe 1 hsfocushsrefseq7cdf 1 hsfocushsug7probe 1 hsfocusptense7probe 1 mm11ksubammentrezgprobe 1 mm11ksubbmmentrezgprobe 1 rn230brnenstcdf 1 rn230brnrefseq 2 rn34arnentrezgprobe 1 rn34arnrefseq 2 rnex10stv1rnenstcdf 1 cfcanine2cfenst7probe 1 dmdrosophila2dmug7probe 1 hs133av2hsense7probe 1 hs133av2hsentrezg7probe 1 hs133av2ptense7cdf 1 hs133av2ptensg7probe 1 hs133phsentrezg7probe 1 hs95av2hsug7probe 1 hs133bhsenseprobe 1 hs133bptenseprobe 1 hs133phsenseprobe 1 hs133phsrefseqprobe 1 hs133pptensecdf 2 hs133pptensgprobe 1 hs133xhsenseprobe 2 dName.db 2 scop.db 1 Norway981 2 hs133av2ptensg 2 SHDZ 1 mmex10stv1mmrefseq 1 hs133pptrefseqcdf 1 hs133xhsvegagcdf 1 hs95av2hsvegagprobe 1 hs95av2hsvegat 1 hs95av2hsvegatcdf 1 hsfocushsensecdf 1 hsfocushsvegatcdf 1 mamurhesusmamuensgprobe 1 mm11ksubammvegag 1 mm430a2mmensg 1 mm430a2mmug 1 mm430a2mmvegae 1 mm430a2mmvegaeprobe 1 mm430ammentrezgcdf 1 mm430mmenseprobe 1 mm430mmensgcdf 1 mm430mmentrezgcdf 1 mm430mmrefseqprobe 2 mm430mmugcdf 1 mm430mmvegae 1 mm74av1mmugprobe 2 mm74av1mmvegat 1 mm74av2mmentrezg 2 mm74av2mmugcdf 2 mm74av2mmvegagprobe 1 mm74bv2mmenseprobe 1 mm74bv2mmensg 1 mm74bv2mmensgprobe 1 mm74bv2mmentrezgcdf 2 mm74bv2mmentrezgprobe 1 mm74bv2mmvegag 1 mm74cv2mmense 2 mm74cv2mmvegagprobe 1 cfcanine2cfensg7probe 1 mmex10stv1mmensecdf 1 hsex10stv2ptensgprobe 1 hsex10stv2ptentrezgprobe 1 osriceostigrcdf 1 MeSH.Bsu.Bsn5.eg.db 0 EnsDb.Hsapiens.v75 873 pd.mta.1.0 41 MeSH.Bta.eg.db 5 MeSH.Ana.eg.db 4 MeSH.Aml.eg.db 5 MeSH.Vvi.eg.db 5 MeSH.Mes.eg.db 4 MeSH.Nle.eg.db 5 MeSH.Cpo.eg.db 5 MeSH.Lma.eg.db 5 MeSH.Mga.eg.db 5 MeSH.Cin.eg.db 5 MeSH.Sau.N315.eg.db 0 rtu34 2 sschomology 2 rnex10stv1rnentrezg7cdf 1 rnex10stv1rnense7cdf 1 rn230rnensg7cdf 1 rn230brnensg7probe 1 rn230arnensg7cdf 1 moe430a 2 moe430b 2 TxDb.Athaliana.BioMart.plantsmart28 59 BSgenome.Vvinifera.URGI.IGGP12Xv0 17 hu35ksubb 2 hs133pptentrezgprobe 2 mm11ksubbmmenstcdf 1 rn34arnugprobe 1 mm11ksubammenst7probe 1 mm11ksubammrefseq7probe 1 mm11ksubammug7cdf 1 mm11ksubbmmentrezg7cdf 1 mm11ksubbmmrefseq7cdf 1 mm430ammentrezg7cdf 1 mm430ammrefseq7probe 1 mm430ammug7cdf 1 mm430ammug7probe 1 mm430bmmug7cdf 1 mm430mmense7cdf 1 mm430mmentrezg7probe 1 mm74av1mmensg7cdf 1 mm74av2mmensg7cdf 1 mm74av2mmensg7probe 1 mm74av1mmug7probe 1 mm74av2mmrefseq7cdf 1 mmex10stv1mmentrezg7cdf 1 atgenomeattair 1 ath1atrefseqcdf 1 ggchickenggense7cdf 1 hs133xhsrefseqcdf 1 hs133xptentrezgprobe 2 hs95av2hsensecdf 1 hs95av2ptentrezg 1 hs95av2ptense 1 btbovinebtense 1 btbovinebtentrezgprobe 1 cfcanine2cfrefseq 1 cfcanine2cfrefseqprobe 1 cinhomology 2 dmgenome1dmensgprobe 1 drzebrafishdrensgcdf 1 drzebrafishdrentrezg 2 ggchickenggensecdf 1 ggchickenggugcdf 1 hs133ahsentrezgprobe 1 hs133ahsrefseqprobe 2 hs133ahsvegaecdf 1 hs133ahsvegagprobe 1 hs133ahsvegat 1 hs133av2hsenst 1 hs133av2hsensg 1 hsex10stv2ptensg7probe 1 hsfocushsensg7cdf 1 hsfocushsentrezg7cdf 1 hu35ksubc 2 klahomology 2 m10kcod 2 mm11ksubammenstcdf 1 mm11ksubammentrezgcdf 1 mm11ksubammugprobe 2 rn230arnrefseqprobe 1 rn230arnugprobe 2 rn230brnenst 2 rn230rnensgprobe 1 rn230rnenst 1 rn34arnensecdf 1 rn34arnensgcdf 1 rn34arnenstprobe 1 rn34arnugcdf 2 rnex10stv1rnenst 1 cfcanine2cfentrezg7probe 1 dmgenome1dmense7probe 1 dmgenome1dmrefseq7cdf 1 drzebrafishdrenst7probe 1 drzebrafishdrentrezg7probe 1 hs133ahsentrezg7cdf 1 hs133av2hsense7cdf 1 hs133av2hsensg7cdf 1 hs133av2hsrefseq7cdf 1 hs133av2hsrefseq7probe 1 hs133av2hsug7cdf 1 hs133phsense7cdf 1 hs133phsrefseq7cdf 1 hs133phsug7cdf 1 hs133xhsenst7cdf 1 hs95av2hsentrezg7cdf 1 hs95av2hsentrezg7probe 1 hs133xhsug7cdf 1 hs133xptense7probe 1 hs95av2hsensg7cdf 1 hs133bhsentrezg 1 hs133bhsrefseqcdf 2 hs133bhsug 2 hs133bptenstprobe 2 hs133phsensgprobe 1 hs133phsenst 1 hs133phsug 1 hs133phsugcdf 2 hs133pptense 1 hs133pptensgcdf 2 hs133xhsense 2 hs133av2hsvegat 1 org.Rn.ipi.db 1 org.Hs.cross.db 2 hsfocusptrefseq 1 hs133av2hsvegagprobe 1 hs133av2ptense 1 hs133av2ptrefseqprobe 1 hs133bptrefseq 1 hs133phsvegae 1 ri16cod 2 rn230arnensg 2 mmex10stv1mmentrezgprobe 1 hs133pptrefseq 1 hs133xhsvegaecdf 1 hs133xhsvegag 1 hs133xptrefseqprobe 1 hs95av2hsvegaecdf 1 hsfocushsvegatprobe 1 hsfocusptenseprobe 1 hsfocusptentrezg 1 illuminaRatv1 1 mamurhesusmamuenseprobe 1 mamurhesusmamuugprobe 1 mm11ksubammvegaeprobe 1 mm11ksubammvegagcdf 1 mm11ksubammvegagprobe 1 mm11ksubbmmvegagcdf 1 mm430a2mmensecdf 1 mm430a2mmrefseqprobe 1 mm430a2mmvegaecdf 1 mm430a2mmvegagcdf 1 mm430a2mmvegatprobe 1 mm430ammenstprobe 1 mm430ammrefseq 1 mm430ammrefseqprobe 1 mm430bmmensgcdf 1 mm74av1mmensgprobe 1 mm74av1mmenstprobe 2 mm74av1mmrefseqprobe 1 mm74av1mmugcdf 2 mm74av1mmvegag 1 mm74av2mmensgprobe 1 mm74av2mmenstcdf 1 mm74av2mmugprobe 1 mm74bv2mmenst 2 mm74bv2mmenstcdf 1 mm74bv2mmrefseq 1 mm74cv2mmenseprobe 2 mm74cv2mmugcdf 2 mm74cv2mmugprobe 2 OperonHumanV3 2 osriceosrefseqprobe 1 MmusculusGenome.mm7 1 atgenomeatrefseq7probe 1 vvgrapevvtigrprobe 1 BSgenome.Mmusculus.UCSC.mm6 1 hsex10stv2ptensecdf 1 hsex10stv2ptenstcdf 1 osriceostigr 1 illuminaHumanv2ProbeID.db 1 MeSH.Bsu.168.eg.db 6 grasp2db 54 hta20stprobeset.db 1 hta20sttranscriptcluster.db 2 MeSH.Eco.55989.eg.db 5 EnsDb.Mmusculus.v79 738 MeSH.Gga.eg.db 4 MeSH.Eco.O127.H6.E2348.69.eg.db 1 MeSH.Gma.eg.db 5 MeSH.Ptr.eg.db 5 MeSH.Aga.PEST.eg.db 5 MeSH.Xtr.eg.db 5 MeSH.Sau.USA300TCH1516.eg.db 1 MeSH.Rno.eg.db 5 MeSH.Pae.PA14.eg.db 0 MeSH.Sau.RF122.eg.db 0 MeSH.Eco.O157.H7.EC4115.eg.db 0 MeSH.Eco.BW2952.eg.db 0 MeSH.Pae.PA7.eg.db 0 XtraSNPlocs.Hsapiens.dbSNP144.GRCh38 144 scehomology 1 vvgrapevvtigr7probe 1 rnohomology 2 rnex10stv1rnenst7cdf 1 rn34arnense7probe 1 rn230rnentrezg7probe 1 rn230rnensg7probe 1 rn230brnense7probe 1 rn34arnenst7cdf 1 rn230brnenst7probe 1 rn230arnrefseq7probe 1 rn230arnense7cdf 1 rgu34b 2 ratLLMappings 2 ptrhomology 2 BSgenome.Vvinifera.URGI.IGGP12Xv2 25 btbovinebtenstcdf 1 mm430a2mmrefseq 1 mgug4104a 2 mm11ksubammensg7probe 1 mm430ammense7cdf 1 mm430bmmenst7probe 1 mm430bmmrefseq7cdf 1 mm74av1mmense7cdf 1 mm74av2mmense7probe 1 mmex10stv1mmenst7cdf 1 atgenomeattaircdf 1 ath1atrefseqprobe 1 ggchickenggensg7probe 1 mu19ksubb 2 osriceosrefseq7probe 1 osriceostigr7probe 1 hs133xptense 2 hs133xptensecdf 1 hs95av2hsensgcdf 2 hs95av2hsensgprobe 2 hs95av2ptentrezgcdf 2 hs95av2hsrefseqprobe 2 hsex10stv2hsense 1 hsex10stv2hsenstprobe 2 btbovinebtentrezg 1 canine2 2 cfcanine2cfvegatprobe 1 dmdrosophila2dmenst 1 dmdrosophila2dmugprobe 1 dmgenome1dmenseprobe 1 dmgenome1dmrefseqprobe 1 drehomology 2 drzebrafishdrrefseqcdf 1 ggchickenggense 1 ggchickenggenstprobe 1 hs133ahsenseprobe 2 hs133ahsensgprobe 1 hs133aptensgprobe 1 hs133aptenstprobe 2 hs133aptrefseqcdf 1 hs133av2hsentrezgprobe 1 hsex10stv2hsensg7probe 1 hsex10stv2hsenst7probe 1 hsex10stv2hsentrezg7cdf 1 hsex10stv2hsentrezg7probe 1 hsfocushsug7cdf 1 hsfocusptense7cdf 1 mm11ksubammensgprobe 1 mm11ksubammrefseqcdf 1 mm11ksubbmmrefseqcdf 1 mm11ksubbmmug 1 rn230arnrefseqcdf 1 rn230brnense 1 rn230brnenstprobe 1 rn230brnrefseqcdf 1 rn34arnrefseqcdf 1 rnex10stv1rnensgcdf 1 dmdrosophila2dmense7cdf 1 dmdrosophila2dmenst7probe 1 cfcanine2cfrefseq7cdf 1 cfcanine2cfug7cdf 1 dmdrosophila2dmug7cdf 1 dmgenome1dmug7probe 1 drzebrafishdrense7cdf 1 drzebrafishdrensg7cdf 1 drzebrafishdrentrezg7cdf 1 drzebrafishdrrefseq7cdf 1 hs133aptense7cdf 1 hs133bhsenst7cdf 1 hs133phsense7probe 1 hs95av2hsrefseq7probe 1 hs95av2hsenst7cdf 1 hs133av2ptentrezgcdf 1 hs133bhsensg 2 hs133bhsensgcdf 2 hs133bhsenst 1 hs133bhsrefseq 2 hs133bhsrefseqprobe 1 hs133bhsugcdf 1 hs133phsenstprobe 1 hs133pptenstprobe 1 HsapiensGenome.hg17 1 hsfocushsenst 1 mm430bmmenstcdf 1 hsfocushsvegat 1 org.Mm.cross.db 1 org.HsMm.ortholog.db 1 homolog.db 1 int.geneint.db 2 org.Hs.bf.db 2 org.Rn.ref.db 2 Roberts2005Annotation 1 hcgi8k 1 hs133av2ptrefseq 1 hs133bptrefseqprobe 1 pedbarrayv9 2 rn230arnensecdf 1 mmex10stv1mmenst 1 hs133xhsvegaeprobe 1 hs133xptrefseq 1 hsfocushsentrezg 1 hsfocushsrefseqprobe 2 hsfocushsug 1 hsfocushsvegaeprobe 1 hsfocushsvegagprobe 1 hsfocusptense 1 hsfocusptensecdf 1 mamurhesusmamuugcdf 1 mm11ksubammvegae 1 mm11ksubbmmvegaecdf 1 mm11ksubbmmvegatcdf 1 mm430a2mmugprobe 1 mm430ammvegae 1 mm430bmmensecdf 1 mm430bmmrefseqcdf 1 mm430bmmugcdf 1 mm430bmmvegaecdf 1 mm430mmvegagcdf 1 mm430mmvegat 1 mm430mmvegatcdf 1 mm74av1mmentrezg 1 mm74av1mmug 2 mm74av2mmensgcdf 1 mm74av2mmentrezgcdf 1 mm74av2mmug 2 mm74av2mmvegaecdf 1 mm74bv2mmense 1 mm74bv2mmvegaecdf 1 mm74bv2mmvegagcdf 1 mm74bv2mmvegatcdf 1 mpedbarray 1 hsex10stv2ptense 1 hsex10stv2ptensg 1 hsex10stv2ptensgcdf 1 hsex10stv2ptenstprobe 1 MeSH.Eco.536.eg.db 0 illuminaRatv1ProbeID.db 1 MeSH.Hsa.eg.db 8 MeSH.Atu.K84.eg.db 1 EnsDb.Mmusculus.v75 34 MeSH.Cel.eg.db 5 MeSH.Osa.eg.db 6 MeSH.Spu.eg.db 5 MeSH.Der.eg.db 5 MeSH.Sco.A32.eg.db 5 MeSH.Eco.K12.MG1655.eg.db 5 MeSH.Pab.eg.db 5 MeSH.Cja.eg.db 5 MeSH.Dgr.eg.db 5 MeSH.Dpe.eg.db 5 MeSH.Sau.ED98.eg.db 0 MeSH.Sau.Newman.eg.db 0 MeSH.Sau.MSHR1132.eg.db 0 XtraSNPlocs.Hsapiens.dbSNP144.GRCh37 103 zmahomology 2 taehomology 2 vvihomology 2 rnu34 2 rnex10stv1rnentrezg7probe 1 rnex10stv1rnenst7probe 1 rn34arnrefseq7probe 1 rn230rnrefseq7cdf 1 rn230brnense7cdf 1 rn34arnug7cdf 1 rn230arnentrezg7cdf 1 rn230brnentrezg7cdf 1 rn230arnenst7probe 1 rn230arnense7probe 1 rgug4130a 2 rn230arnug7cdf 1 rgu34a 2 BSgenome.Hsapiens.1000genomes.hs37d5 928 hs133av2hsugcdf 2 drzebrafishdrvegat 1 mgug4120a 1 mgug4121a 2 mm11ksubammenst7cdf 1 mm11ksubbmmense7cdf 1 mm11ksubammrefseq7cdf 1 mm430ammense7probe 1 mm430bmmense7probe 1 mm430bmmensg7cdf 1 mm430bmmenst7cdf 1 mm430bmmrefseq7probe 1 mm430mmenst7cdf 1 mm430mmrefseq7cdf 1 mm430mmrefseq7probe 1 mm430mmug7cdf 1 mm430mmug7probe 1 mm74av1mmense7probe 1 mm74av2mmenst7probe 1 mm74av2mmug7cdf 1 mmex10stv1mmense7probe 1 mmex10stv1mmensg7cdf 1 mmex10stv1mmensg7probe 1 mmex10stv1mmug7probe 1 atgenomeatrefseq 1 atgenomeatrefseqprobe 1 ath1attaircdf 1 ath1attairprobe 1 BSgenome.Hsapiens.UCSC.hg16 1 ggchickenggenst7cdf 1 ggchickenggrefseq7probe 1 ggchickenggug7probe 1 ggahomology 1 ncrhomology 2 osriceosrefseq7cdf 1 hs25kresogen 1 hs95av2hsenseprobe 1 hs95av2hsrefseq 1 hsex10stv2hsenseprobe 1 hsex10stv2hsentrezgprobe 1 hsex10stv2hsrefseqcdf 1 btbovinebtensgcdf 1 btbovinebtug 1 btbovinebtugcdf 1 btbovinebtugprobe 1 cfcanine2cfvegat 1 dmdrosophila2dmensecdf 1 dmdrosophila2dmenseprobe 1 dmdrosophila2dmensgprobe 1 dmdrosophila2dmug 1 dmehomology 1 dmgenome1dmenstprobe 1 dmgenome1dmrefseq 1 dmgenome1dmrefseqcdf 1 dmgenome1dmugprobe 1 drzebrafishdrense 1 drzebrafishdrrefseq 1 drzebrafishdrug 1 ggchickenggensg 1 hs133ahsense 2 hs133ahsensecdf 1 hs133aptensg 1 hs133av2hsenstcdf 1 hs133av2hsrefseqcdf 1 hs133av2hsvegae 1 hsex10stv2hsrefseq7probe 1 hsex10stv2hsug7probe 1 hsfocushsenst7cdf 1 hsfocushsenst7probe 1 mguatlas5k 2 mm11ksubammensgcdf 1 mm11ksubammugcdf 1 mm11ksubbmmensecdf 1 mm11ksubbmmensgcdf 2 mm11ksubbmmensgprobe 1 mm11ksubbmmenst 2 mm11ksubbmmentrezgcdf 1 mm11ksubbmmugcdf 1 rn230arnensgprobe 1 rn230arnenst 1 rn230arnenstcdf 1 rn230arnenstprobe 1 rn230arnentrezgprobe 1 rn230brnenseprobe 2 rn230brnensgcdf 1 rn230brnrefseqprobe 1 rn230brnugcdf 2 rn230brnugprobe 1 rn230rnenstprobe 2 rn230rnrefseq 1 rn230rnrefseqprobe 1 rn230rnug 1 rn34arnensgprobe 2 rn34arnenstcdf 1 rn34arnentrezgcdf 1 rn34arnug 1 rnex10stv1rnentrezg 1 dmdrosophila2dmrefseq7cdf 1 dmgenome1dmensg7probe 1 dmgenome1dmenst7cdf 1 hs133ahsense7cdf 1 hs133ahsenst7probe 1 hs133ahsentrezg7probe 1 hs133ahsrefseq7cdf 1 hs133bhsug7probe 1 hs133phsensg7cdf 1 hs133phsensg7probe 1 hs95av2hsrefseq7cdf 1 hs133xptense7cdf 1 hs95av2hsenst7probe 1 hs95av2hsug7cdf 1 hs133av2ptenstprobe 2 hs133bhsensgprobe 1 hs133bhsenstcdf 1 hs133bhsentrezgcdf 1 hs133bhsentrezgprobe 1 hs133bptensgcdf 1 hs133bptentrezgprobe 1 hs133phsensgcdf 1 hs133pptenst 2 hs133pptenstcdf 2 hs133xhsensecdf 2 mm74av2mmrefseq 1 hsfocushsvegag 1 org.Hs.pep.db 1 int.did.db 1 sc.bacello.db 1 sysptm.db 2 org.Hs.goa.db 3 mm74av2mmvegat 1 hs133av2ptensgprobe 1 hs133bhsvegaecdf 1 hs133bhsvegagprobe 1 hs133bhsvegat 1 PartheenMetaData 1 hs133xhsvegagprobe 1 hsfocushsensgprobe 1 hsfocushsenstcdf 1 JazaeriMetaData 1 mm11ksubammvegaecdf 1 mm11ksubammvegatprobe 1 mm11ksubbmmvegag 1 mm11ksubbmmvegat 1 mm430a2mmensgcdf 1 mm430ammrefseqcdf 1 mm430ammugprobe 1 mm430ammvegagcdf 1 mm430ammvegatcdf 1 mm430bmmense 1 mm430bmmenstprobe 1 mm430bmmrefseqprobe 2 mm430bmmvegag 1 mm430bmmvegat 1 mm430bmmvegatprobe 1 mm430mmenstcdf 1 mm74av1mmensecdf 1 mm74av1mmensg 1 mm74av1mmenstcdf 1 mm74av1mmvegaecdf 1 mm74av1mmvegatcdf 1 mm74av2mmenst 1 mm74av2mmenstprobe 2 mm74av2mmvegagcdf 1 mm74bv2mmentrezg 1 mm74bv2mmugcdf 1 mm74bv2mmvegat 1 mm74cv2mmensgcdf 1 mm74cv2mmensgprobe 1 mm74cv2mmentrezgcdf 1 mm74cv2mmrefseq 2 osriceosrefseq 1 vvgrapevvtigr 1 mmex10stv1mmense 1 mmex10stv1mmensg 1 hsex10stv2ptentrezgcdf 1 MeSH.Eco.B.REL606.eg.db 0 MeSH.Eco.O111.H.11128.eg.db 0 illuminaMousev2ProbeID.db 1 mamurhesusmamurefseq 1 BSgenome.Hsapiens.UCSC.hg38.masked 194 MeSH.Ddi.AX4.eg.db 5 MeSH.Zma.eg.db 5 MeSH.Mtr.eg.db 4 MeSH.Ssc.eg.db 4 MeSH.Cal.SC5314.eg.db 5 MeSH.Eco.O157.H7.Sakai.eg.db 5 celhomology 2 MeSH.Sau.MSSA476.eg.db 0 MeSH.Sau.M013.eg.db 0 MeSH.Sau.VC40.eg.db 0 zebrafish 2 ygs98 2 xenopuslaevis 2 rnex10stv1rnensg7probe 1 rn34arnug7probe 1 rn230rnug7cdf 1 rn34arnense7cdf 1 rn230rnug7probe 1 rnex10stv1rnrefseq7probe 1 rn230brnentrezg7probe 1 rn34arnrefseq7cdf 1 rn230rnenst7probe 1 rgug4105a 1 hu35ksuba 2 hs133bptensgprobe 2 hs133ahsenst 1 mm11ksubammensecdf 1 mm430mmentrezgprobe 1 mm430ammvegagprobe 1 btbovinebtensgprobe 1 mm11ksubammense7cdf 1 mm11ksubammentrezg7cdf 1 mm11ksubbmmense7probe 1 mm11ksubbmmensg7probe 1 mm11ksubbmmug7cdf 1 mm11ksubbmmug7probe 1 mm430ammenst7probe 1 mm430bmmense7cdf 1 mm74av1mmenst7cdf 1 mm74av1mmentrezg7probe 1 mmex10stv1mmentrezg7probe 1 ggchickenggrefseq7cdf 1 osriceostigr7cdf 1 hs133xhsug 2 hs133xptenstprobe 1 hs133xptentrezgcdf 1 hs95av2hsentrezgprobe 1 hs95av2ptentrezgprobe 2 hsex10stv2hsug 1 btbovinebtenseprobe 1 cfcanine2cfensgprobe 2 cfcanine2cfug 1 cfcanine2cfvegatcdf 1 dmdrosophila2dmensg 1 dmdrosophila2dmugcdf 1 dmgenome1dmensgcdf 1 drosgenome1 2 drzebrafishdrensecdf 1 drzebrafishdrenseprobe 1 ggchickenggentrezgcdf 1 ggchickenggrefseq 1 hgug4111a 2 hs133ahsug 2 hs133ahsugcdf 1 hs133ahsvegatcdf 1 hs133aptenstcdf 1 hs133av2hsrefseqprobe 1 hsex10stv2hsense7probe 1 hsex10stv2hsensg7cdf 1 hsfocusptensg7cdf 1 mgu74bv2 2 mgu74c 2 mm11ksubammenseprobe 1 mm11ksubbmmrefseqprobe 1 mm24kresogen 2 mm430ammensecdf 1 rn230arnentrezg 2 rn230brnensgprobe 2 rn230rnentrezgcdf 2 rn34arnensg 1 rn34arnenst 1 rnex10stv1rnensecdf 1 rnex10stv1rnrefseq 1 hs133ahsensg7probe 1 hs133ahsug7cdf 1 hs133aptensg7probe 1 hs133av2hsenst7probe 1 hs133av2hsentrezg7cdf 1 hs133av2hsug7probe 1 hs133bhsentrezg7cdf 1 hs133bhsrefseq7probe 1 hs95av2hsense7probe 1 hs133av2ptentrezgprobe 1 hs133bhsensecdf 1 hs133bptensecdf 2 hs133phsensg 2 hs133xhsensgcdf 2 rnex10stv1rnrefseqprobe 1 rnex10stv1rnugcdf 1 hsfocushsvegaecdf 1 int.intact.db 2 org.Mm.sp.db 2 hs133av2hsvegag 1 hs133av2hsvegatcdf 1 hs133bhsvegae 1 hs133phsvegaecdf 1 hs133phsvegaeprobe 1 hs133phsvegag 1 hs133phsvegat 1 mmex10stv1mmenstprobe 1 mmex10stv1mmentrezg 1 mmex10stv1mmentrezgcdf 1 mmex10stv1mmug 1 mmex10stv1mmugprobe 1 hs133xhsvegatcdf 1 hs133xptrefseqcdf 1 hsfocushsenseprobe 1 hsfocushsenstprobe 1 hsfocushsrefseq 2 hsfocushsrefseqcdf 1 hsfocushsvegae 1 hsfocushsvegagcdf 1 hsfocusptensg 1 hsfocusptensgprobe 1 hsfocusptenstprobe 2 hsfocusptentrezgcdf 1 mamurhesusmamuense 1 mamurhesusmamuensg 1 mamurhesusmamuentrezgcdf 1 mamurhesusmamuug 1 mm11ksubbmmvegae 1 mm11ksubbmmvegagprobe 1 mm430a2mmenseprobe 1 mm430a2mmentrezg 1 mm430a2mmentrezgcdf 1 mm430a2mmvegatcdf 1 mm430ammenseprobe 1 mm430ammenstcdf 1 mm430bmmentrezgcdf 1 mm430bmmugprobe 1 mm430bmmvegagcdf 1 mm430mmvegatprobe 1 mm74av1mmensgcdf 1 mm74av1mmrefseqcdf 1 mm74av1mmvegae 1 mm74av1mmvegaeprobe 1 mm74av2mmenseprobe 2 mm74av2mmentrezgprobe 2 mm74av2mmvegaeprobe 1 mm74av2mmvegag 1 mm74av2mmvegatprobe 1 mm74bv2mmenstprobe 1 mm74bv2mmrefseqcdf 1 mm74bv2mmvegaeprobe 1 mm74cv2mmensg 1 mm74cv2mmvegae 1 mm74cv2mmrefseqprobe 1 mm74cv2mmvegagcdf 1 mm74cv2mmvegatprobe 1 ath1attigr7cdf 1 hsex10stv2ptenst 1 hsex10stv2ptentrezg 1 MeSH.Sau.Mu50.eg.db 0 MeSH.Eco.UTI89.eg.db 0 illuminaMousev1p1ProbeID.db 1 mamurhesusmamurefseqprobe 1 BSgenome.Hsapiens.UCSC.hg38 3947 TxDb.Athaliana.BioMart.plantsmart25 19 EnsDb.Hsapiens.v79 343 phastCons7way.UCSC.hg38 62 MeSH.Dme.eg.db 5 MeSH.Bsu.TUB10.eg.db 2 EnsDb.Rnorvegicus.v75 17 MafDb.ALL.wgs.phase3.release.v5a.20130502 2 MeSH.Tgo.ME49.eg.db 4 MeSH.Oni.eg.db 4 MeSH.Dya.eg.db 5 MeSH.Eco.HS.eg.db 2 MeSH.Cfa.eg.db 5 MeSH.Eco.S88.eg.db 2 h10kcod 2 MeSH.Eco.O26.H11.11368.eg.db 0 MeSH.Sau.MW2.eg.db 0 MeSH.Eco.O157.H7.TW14359.eg.db 0 MeSH.Eco.SMS35.eg.db 0 MeSH.Bsu.W23.eg.db 0 SNPlocs.Hsapiens.dbSNP144.GRCh37 994 spohomology 2 vvgrapevvtigr7cdf 1 rn230rnense7probe 1 rn230brnrefseq7cdf 1 rn34arnensg7cdf 1 rn230arnentrezg7probe 1 rn230arnensg7probe 1 prt440acdf 1 prt440scdf 1 greengenes13.5MgDb 4 mgrhomology 1 mm430a2mmrefseqcdf 1 mm11ksubammentrezg7probe 1 mm11ksubammug7probe 1 mm11ksubbmmenst7cdf 1 mm430ammensg7cdf 1 mm430bmmentrezg7probe 1 mm430bmmug7probe 1 mm430mmenst7probe 1 mm74av1mmentrezg7cdf 1 mm74av2mmentrezg7probe 1 mmex10stv1mmug7cdf 1 atgenomeatrefseqcdf 1 atgenomeattigrcdf 1 ath1attigrprobe 1 ggchickenggense7probe 1 ggchickenggug7cdf 1 hcg110 2 mu19ksuba 2 mu19ksubc 2 hs133xhsentrezg 2 hs133xhsentrezgcdf 2 hs133xhsrefseq 1 hs133xhsrefseqprobe 1 hs133xhsugcdf 1 hs133xhsugprobe 1 hs133xptensgcdf 2 hs133xptentrezg 2 hs95av2hsugprobe 1 hs95av2ptenseprobe 1 hsex10stv2hsenst 1 btbovinebtrefseq 1 cfcanine2cfenseprobe 1 cfcanine2cfensgcdf 1 cfcanine2cfenst 1 cfcanine2cfenstcdf 1 cfcanine2cfentrezgcdf 1 chicken 1 dmgenome1dmug 1 drzebrafishdrenst 1 drzebrafishdrenstcdf 1 drzebrafishdrentrezgcdf 1 drzebrafishdrrefseqprobe 1 ggchickenggenseprobe 1 ggchickenggrefseqcdf 1 ggchickenggrefseqprobe 1 hgug4101a 2 hgug4110b 2 hs133ahsensg 2 hs133ahsrefseq 1 hs133ahsvegag 1 hs133aptense 1 hs133aptenseprobe 2 hs133aptenst 1 hs133aptrefseq 1 hs133aptrefseqprobe 1 hs133av2hsensecdf 2 hs133av2hsensgcdf 1 hs133av2hsrefseq 1 hs133av2hsvegaecdf 1 hsex10stv2ptense7cdf 1 hsfocushsense7cdf 1 mgu74cv2 2 mm11ksubammense 1 mm11ksubammenst 1 mm11ksubbmmense 1 mm11ksubbmmenseprobe 2 mm11ksubbmmensg 2 mm11ksubbmmenstprobe 1 mm11ksubbmmentrezg 1 mm11ksubbmmugprobe 1 mm430ammense 1 rn230arnug 2 rn230brnensg 1 rn230rnense 1 rn230rnenstcdf 2 rn34arnense 1 rn34arnrefseqprobe 1 rnex10stv1rnense 1 rnex10stv1rnensg 1 rnex10stv1rnensgprobe 1 rnex10stv1rnentrezgcdf 1 dmdrosophila2dmensg7cdf 1 cfcanine2cfentrezg7cdf 1 cfcanine2cfrefseq7probe 1 cfcanine2cfug7probe 1 drzebrafishdrensg7probe 1 hs133ahsense7probe 1 hs133bhsensg7cdf 1 hs133bhsensg7probe 1 hs133bptense7cdf 1 hs133xhsentrezg7cdf 1 hs133xhsrefseq7cdf 1 hs133av2ptenstcdf 1 hs133bhsenstprobe 2 hs133bptense 1 hs133bptenstcdf 1 hs133phsugprobe 2 hs133pptentrezg 1 hs133xhsensgprobe 1 hs133xhsenst 1 rnex10stv1rnugprobe 1 hsfocusptenst 1 rn230arnensgcdf 1 org.Mm.ref.db 1 org.Mm.ipi.db 1 hs133av2ptensecdf 1 hs133av2ptenseprobe 1 hs133bhsvegaeprobe 1 hs133bhsvegatprobe 1 hs133bptrefseqcdf 1 hs133phsvegagcdf 1 hs133phsvegagprobe 1 rn230arnenseprobe 1 mmex10stv1mmensgprobe 1 mmex10stv1mmenstcdf 1 mmex10stv1mmrefseqprobe 1 mmex10stv1mmugcdf 1 hs133pptrefseqprobe 1 hs95av2hsvegae 1 hs95av2hsvegaeprobe 1 hs95av2hsvegagcdf 1 hs95av2hsvegatprobe 1 hsfocushsensgcdf 1 hsfocushsentrezgprobe 1 mamurhesusmamuenstprobe 1 mamurhesusmamuentrezg 1 mamurhesusmamuentrezgprobe 1 mm11ksubammvegat 1 mm430a2mmense 1 mm430a2mmvegag 1 mm430a2mmvegagprobe 1 mm430a2mmvegat 1 mm430ammug 2 mm430ammvegat 1 mm430bmmentrezgprobe 1 mm430bmmrefseq 1 mm430bmmvegae 1 mm430bmmvegaeprobe 1 mm430bmmvegatcdf 1 mm430mmensgprobe 1 mm430mmenst 1 mm430mmentrezg 1 mm430mmrefseq 1 mm430mmug 1 mm430mmugprobe 2 mm74av1mmenseprobe 1 mm74av2mmense 1 mm74av2mmensg 2 mm74av2mmvegae 1 mm74av2mmvegatcdf 1 mm74bv2mmensecdf 1 mm74cv2mmenstcdf 1 mm74cv2mmenstprobe 1 mm74cv2mmentrezgprobe 1 mm74cv2mmrefseqcdf 1 mm74cv2mmvegaecdf 1 mm74cv2mmvegatcdf 1 atgenomeatrefseq7cdf 1 cfcanine2cfense7probe 1 osriceostigrprobe 1 mm430a2mmenstcdf 1 BSgenome.Tguttata.UCSC.taeGut2 18 mamurhesusmamurefseqcdf 1 BSgenome.Btaurus.UCSC.bosTau8 27 LowMACAAnnotation 23 MeSH.Mdo.eg.db 5 MeSH.Eco.O157.H7.EDL933.eg.db 2 MeSH.Miy.eg.db 5 MeSH.Bfl.eg.db 5 MeSH.Ani.FGSC.eg.db 5 MeSH.Mmu.eg.db 6 MeSH.Eco.CFT073.eg.db 2 MeSH.Ame.eg.db 5 MeSH.Oan.eg.db 4 MeSH.Cre.eg.db 4 MeSH.Sce.S288c.eg.db 4 MeSH.Bsu.RONN1.eg.db 0 MeSH.Sau.Mu3.eg.db 0 rnex10stv1rnrefseq7cdf 1 rn34arnentrezg7cdf 1 rnex10stv1rnug7probe 1 rnex10stv1rnensg7cdf 1 rn34arnentrezg7probe 1 rn230brnensg7cdf 1 rn230brnug7cdf 1 rn230arnenst7cdf 1 rn230arnug7probe 1 hcgi12k 1 mu11ksuba 2 hsfocushsensg 1 hsfocusptensgcdf 1 ath1attigr7probe 1 mm430ammensg7probe 1 mm430ammentrezg7probe 1 mm430mmense7probe 1 mm430mmensg7probe 1 mm74av1mmensg7probe 1 mm74av1mmrefseq7cdf 1 mm74av2mmentrezg7cdf 1 mm74av2mmrefseq7probe 1 mm74av2mmug7probe 1 mmex10stv1mmenst7probe 1 atgenomeattairprobe 1 drzebrafishdrrefseq7probe 1 drzebrafishdrug7probe 1 mu11ksubb 2 omyhomology 2 osahomology 2 pfahomology 2 hs133xptenseprobe 1 hs133xptensg 1 hs133xptenst 1 hs133xptenstcdf 1 hs95av2hsenst 1 hs95av2hsenstprobe 1 hs95av2hsugcdf 1 hs95av2ptensecdf 1 hsex10stv2hsensgprobe 1 hsex10stv2hsenstcdf 1 btbovinebtensecdf 1 btbovinebtentrezgcdf 1 cfcanine2cfensecdf 2 dmdrosophila2dmensgcdf 1 dmdrosophila2dmenstcdf 1 dmdrosophila2dmenstprobe 1 dmgenome1dmensecdf 1 dmgenome1dmenstcdf 1 drzebrafishdrensg 1 drzebrafishdrvegatcdf 1 drzebrafishdrvegatprobe 1 ggchickenggenst 1 ggchickenggugprobe 1 hgubeta7 2 hgug4112a 2 hs133ahsenstprobe 1 hs133ahsvegae 1 hs133ahsvegagcdf 1 hs133ahsvegatprobe 1 hs133aptensecdf 1 hs133aptentrezgcdf 1 hs133av2hsensgprobe 1 HsapiensGenome.hg18 1 hsex10stv2ptense7probe 1 hsfocushsentrezg7probe 1 hsfocusptensg7probe 1 hu35ksubd 2 mgu74a 2 mgu74b 2 mm11ksubammensg 1 mm11ksubammenstprobe 2 mm11ksubbmmrefseq 1 rn230arnentrezgcdf 2 rn230arnugcdf 1 rn230brnensecdf 2 rn230brnentrezgcdf 2 rn230brnug 2 rn230rnenseprobe 1 rn230rnensg 2 rn230rnensgcdf 1 rn230rnrefseqcdf 1 rn34arnentrezg 1 rnex10stv1rnenseprobe 1 rnex10stv1rnrefseqcdf 1 dmdrosophila2dmrefseq7probe 1 DmelanogasterGenome.dm2 1 hs133ahsensg7cdf 1 hs133aptensg7cdf 1 hs133av2ptense7probe 1 hs133bhsenst7probe 1 hs133bhsug7cdf 1 hs133xhsensg7cdf 1 hs95av2hsense7cdf 1 hs95av2hsensg7probe 1 hs95av2ptense7probe 1 hs133av2ptentrezg 2 hs133bptensg 2 hs133bptenst 1 hs133bptentrezgcdf 1 hs133phsensecdf 1 hs133phsenstcdf 1 hs133phsentrezgprobe 1 hs133phsrefseqcdf 2 hs133pptentrezgcdf 1 hs133xhsensg 1 hs133xhsenstcdf 1 hsfocusptenstcdf 1 int.domine.db 2 org.Rn.cross.db 1 ath1atrefseq7probe 1 hs133av2hsvegatprobe 1 hs133bhsvegag 1 hs133bhsvegagcdf 1 hs133bhsvegatcdf 1 rn230arnense 2 mmex10stv1mmrefseqcdf 1 hs133phsvegatprobe 1 hs95av2hsvegag 1 hs95av2ptrefseq 1 hs95av2ptrefseqcdf 1 hsfocushsugprobe 1 hsfocusptentrezgprobe 1 hsfocusptrefseqcdf 1 HuO22 2 mamurhesusmamuenstcdf 1 mm11ksubbmmvegaeprobe 1 mm11ksubbmmvegatprobe 1 mm430a2mmensgprobe 1 mm430a2mmentrezgprobe 1 mm430ammensg 2 mm430ammensgcdf 1 mm430ammentrezgprobe 1 mm430ammvegag 1 mm430ammvegatprobe 1 mm430bmmensg 1 mm430bmmentrezg 1 mm430mmvegaecdf 1 mm430mmvegaeprobe 1 mm430mmvegag 1 mm74av1mmenst 1 mm74av1mmvegagcdf 1 mm74av1mmvegagprobe 1 mm74av1mmvegatprobe 1 mm74av2mmrefseqcdf 1 mm74bv2mmvegae 1 mm74bv2mmvegagprobe 1 mm74bv2mmvegatprobe 1 mm74cv2mmug 2 mm74cv2mmvegaeprobe 1 Mu15v1 1 Mu22v3 1 osriceosrefseqcdf 1 ath1atrefseq7cdf 1 hsex10stv2hsugprobe 1 mmex10stv1mmenseprobe 1 mmex10stv1mmensgcdf 1 hsex10stv2ptenseprobe 1 mm430a2mmenst 1 MeSH.Eco.SE11.eg.db 0 illuminaHumanv1ProbeID.db 1 illuminaMousev1ProbeID.db 1 TxDb.Celegans.UCSC.ce11.refGene 43 fitCons.UCSC.hg19 20 BSgenome.Ggallus.UCSC.galGal5 19 hta20transcriptcluster.db 49 alternativeSplicingEvents.hg19 20 clariomshumanhttranscriptcluster.db 24 pd.clariom.s.rat.ht 22 MafDb.ExAC.r0.3.1.snvs.hs37d5 2 LymphoSeqDB 155 TxDb.Dmelanogaster.UCSC.dm6.ensGene 323 TxDb.Mmulatta.UCSC.rheMac8.refGene 19 IlluminaHumanMethylationEPICanno.ilm10b2.hg19 327 TxDb.Ggallus.UCSC.galGal4.refGene 18 TxDb.Sscrofa.UCSC.susScr3.refGene 17 clariomdhumantranscriptcluster.db 42 pd.clariom.d.human 67 pd.clariom.s.human.ht 38 BSgenome.Vvinifera.URGI.IGGP8X 17 hta20probeset.db 24 MafDb.ESP6500SI.V2.SSA137.hs37d5 4 clariomshumantranscriptcluster.db 32 rta10transcriptcluster.db 17 pd.clariom.s.mouse 46 pd.clariom.s.human 66 TxDb.Rnorvegicus.UCSC.rn6.refGene 133 mta10transcriptcluster.db 20 MafDb.ESP6500SI.V2.SSA137.GRCh38 4 BSgenome.Mmulatta.UCSC.rheMac8 94 clariomsrathttranscriptcluster.db 20 EnsDb.Hsapiens.v86 2868 MafDb.1Kgenomes.phase3.hs37d5 131 BSgenome.Celegans.UCSC.ce11 163 FlowSorted.CordBloodNorway.450k 1 TxDb.Cfamiliaris.UCSC.canFam3.refGene 21 TxDb.Ptroglodytes.UCSC.panTro4.refGene 18 IlluminaHumanMethylation27kanno.ilmn12.hg19 34 clariomdhumanprobeset.db 42 BSgenome.Ptroglodytes.UCSC.panTro5 19 pd.clariom.s.mouse.ht 23 IlluminaHumanMethylationEPICmanifest 1133 miRBaseVersions.db 162 TxDb.Drerio.UCSC.danRer10.refGene 117 MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5 2 lumiMouseIDMapping.db 1 clariomsmousehttranscriptcluster.db 20 clariomsmousetranscriptcluster.db 32 MafDb.1Kgenomes.phase1.hs37d5 158 TxDb.Btaurus.UCSC.bosTau8.refGene 19 TxDb.Mmulatta.UCSC.rheMac3.refGene 17 clariomsrattranscriptcluster.db 21 mta10probeset.db 24 rta10probeset.db 17 pd.clariom.s.rat 24 IlluminaHumanMethylationEPICanno.ilm10b4.hg19 1177 MafDb.gnomAD.r2.0.1.hs37d5 3 MafDb.gnomADex.r2.0.1.hs37d5 4 SNPlocs.Hsapiens.dbSNP149.GRCh38 44 AHCytoBands 17 MafDb.ExAC.r1.0.hs37d5 98 TxDb.Ggallus.UCSC.galGal5.refGene 40 IlluminaHumanMethylationEPICanno.ilm10b3.hg19 36 MafDb.ExAC.r1.0.nonTCGA.hs37d5 20 MafDb.TOPMed.freeze5.hg38 23 SNPlocs.Hsapiens.dbSNP150.GRCh38 57 GenomeInfoDbData 53891 AHEnsDbs 26 alternativeSplicingEvents.hg38 21 TxDb.Sscrofa.UCSC.susScr11.refGene 25 MafDb.gnomADex.r2.0.1.GRCh38 3 TxDb.Ptroglodytes.UCSC.panTro5.refGene 16 LRBase.Xtr.eg.db 3 BSgenome.Ptroglodytes.UCSC.panTro6 19 silva128.1MgDb 3 MafDb.TOPMed.freeze5.hg19 20 MafDb.1Kgenomes.phase1.GRCh38 20 MafDb.gnomAD.r2.1.hs37d5 30 ribosomaldatabaseproject11.5MgDb 3 BSgenome.Sscrofa.UCSC.susScr11 43 SNPlocs.Hsapiens.dbSNP151.GRCh38 11 MafDb.1Kgenomes.phase3.GRCh38 56 MafDb.ExAC.r1.0.nonTCGA.GRCh38 26 MafDb.gnomAD.r2.0.1.GRCh38 4 LRBase.Hsa.eg.db 4 LRBase.Pab.eg.db 3 LRBase.Ssc.eg.db 3 BSgenome.Aofficinalis.NCBI.V1 19 LRBase.Dme.eg.db 3 LRBase.Gga.eg.db 3 MafDb.gnomADex.r2.1.hs37d5 98 org.hs.eg.db 2 LRBase.Bta.eg.db 3 LRBase.Dre.eg.db 3 LRBase.Rno.eg.db 3 JASPAR2018 418 geneplast.data.string.v91 34 LRBase.Mmu.eg.db 3 LRBase.Ath.eg.db 3 LRBase.Cel.eg.db 3 BSgenome.Carietinum.NCBI.v1 19 EuPathDB 21 MafDb.ExAC.r1.0.GRCh38 28 org.Mxanthus.db 28 hpAnnot 19 MafDb.gnomAD.r2.1.GRCh38 31 MafDb.gnomAD.r3.0.GRCh38 4 BSgenome.Cjacchus.UCSC.calJac3 19 BSgenome.Mdomestica.UCSC.monDom5 17 MafDb.gnomADex.r2.1.GRCh38 18 TxDb.Ggallus.UCSC.galGal6.refGene 22 TxDb.Btaurus.UCSC.bosTau9.refGene 25 BSgenome.Ggallus.UCSC.galGal6 38 BSgenome.Drerio.UCSC.danRer11 63 TxDb.Celegans.UCSC.ce11.ensGene 146 ENCODExplorerData 27 TxDb.Drerio.UCSC.danRer11.refGene 33 TxDb.Mmulatta.UCSC.rheMac10.refGene 105 TxDb.Ptroglodytes.UCSC.panTro6.refGene 16 GenomicState 96 BSgenome.Mmulatta.UCSC.rheMac10 159 BSgenome.Btaurus.UCSC.bosTau9 39 rat2302frmavecs 18 go.db 1 JASPAR2020 1598 EpiTxDb.Hs.hg38 55 affy 1 Biobase 9 BiocParallel 19 BSgenome 3 genefilter 2 GenomeGraphs 0 IRanges 22 BSgenome.Amellifera.NCBI.AmelHAv3.1 18 CellMixS 0 ChAMP 1 parallel 0 Ringo 1 tcltk 0 MafH5.gnomAD.r3.0.GRCh38 3 EpiTxDb.Mm.mm10 17 AnnotationDbi 24 base 0 GenomicFeatures 14 grDevices 0 Gviz 2 interactiveDisplayBase 1 facets 0 seqCAT 0 muscat 1 CancerSubtypes 0 CEMiTool 0 rlang 466 preprocessCore 1 Rgraphviz 1 BSgenome.Dvirilis.Ensembl.dvircaf1 15 phastCons30way.UCSC.hg38 16 vcfR 2 limma 37 annotate 2 datasets 0 DESeq 0 gdsfmt 1 grid 1 coMET 0 BSgenome.Ppaniscus.UCSC.panPan1 16 TxDb.Rnorvegicus.UCSC.rn6.ncbiRefSeq 16 BiocWorkflowTools 0 BiocSklearn 0 Rsamtools 4 SeqVarTools 0 stats 0 EpiTxDb.Sc.sacCer3 17 biovizBase 1 DESeq2 5 DEXICA 0 BSgenome.Ppaniscus.UCSC.panPan2 26 ATACseqQC 1 cliqueMS 1 synergyfinder 0 tradeSeq 1 SeqArray 0 zlibbioc 4 metaboliteIDmapping 184 methods 0 multtest 1 biomaRt 2 cummeRbund 0 geneplotter 1 TxDb.Mmusculus.UCSC.mm39.refGene 127 string 1 CATALYST 1 universalmotif 1 tools 0 utils 0 vsn 1 KEGGREST 11 affyio 1 compiler 0 GenomeInfoDb 22 GenomicAlignments 3 GenomicRanges 4 KEGGgraph 1 S4Vectors 12 geneplast.data 42 BSgenome.Creinhardtii.JGI.v5.6 23 geneLenDataBase 10 rstudio 0 sitePath 0 ggtree 14 NOISeq 1 splines 0 stats4 0 SummarizedExperiment 4 VariantAnnotation 1 AnnotationHub 3 BiocGenerics 24 DNAcopy 1 edgeR 12 ensembldb 4 graph 1 graphics 0 MeSH.Eca.eg.db 1 BANDITS 0 CluMSID 0 waddR 0 rtracklayer 3 BiocInstaller 1 Biostrings 17 gage 0 pathview 1 XVector 2 AHMeSHDbs 27 htmg430a.db 16 AHWikipathwaysDbs 19 htrat230pm.db 16 Orthology.eg.db 107 BSgenome.Mmusculus.UCSC.mm39 125 TxDb.Cfamiliaris.UCSC.canFam4.refGene 13 ichorCNA 1 htmg430pm.db 17 chromhmmData 63 excluderanges 98 hthgu133pluspm.db 21 TxDb.Rnorvegicus.UCSC.rn7.refGene 107 kegg.db 0 scAnnotatR.models 15 hthgu133plusb.db 16 AHPathbankDbs 20 AHPubMedDbs 25 BSgenome.Rnorvegicus.UCSC.rn7 113 gwascatData 15 CTCF 26 BSgenome.Hsapiens.UCSC.hg38.dbSNP151.minor 24 synaptome.data 37 karyoploteR 1 htmg430b.db 15 BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major 28 TxDb.Hsapiens.UCSC.hg38.refGene 83 GeneSummary 30 synaptome.db 31 ontoProcData 16 u 0 KaryoploteR 0 MafH5.gnomAD.v3.1.1.GRCh38 7 AHLRBaseDbs 24 rGenomeTracksData 50 hthgu133plusa.db 16 htratfocus.db 16 TxDb.Cfamiliaris.UCSC.canFam5.refGene 13 TxDb.Athaliana.BioMart.plantsmart51 32 p 0 BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0 77 lsa 8 susieR 20 coloc 20 Rsolnp 2 samr 6 restfulr 12 BiocManager 290 RcppAnnoy 46 waiter 12 hdrcde 6 colorRamps 12 FlowSorted.CordBloodCombined.450k 10 ccdata 10 uwot 104 HDO.db 14114 R.rsp 1 kpmt 0 sparklyr 13 tidytree 58 HDF5Array 12 bookdown 41 globals 61 evaluate 415 MASS 331 gtable 221 Matrix 417 rpart 71 pkgload 316 memoise 17 plyr 168 future.apply 176 webshot 36 devtools 35 spam 6 spatstat.utils 33 checkmate 225 aplot 58 enrichR 2 shinyalert 14 htmltools 389 polysat 0 batchelor 1 xaringanthemer 1 dittodb 0 webmockr 1 gamlss.dist 4 ggPMX 1 fork 1 jsTreeR 1 ipaddress 1 interp 19 klaR 3 packrat 38 paletteer 9 pins 21 randtoolbox 1 pmtables 1 partitions 1 reda 1 Rsmlx 1 rsconnect 49 recipes 62 spaMM 1 s2 49 spatialreg 1 terra 43 RAthena 12 RPostgres 77 leaps 7 geosphere 12 odbc 26 paws.security.identity 15 rematch2 2 dtw 1 enc 0 expm 22 rJava 105 extraTrees 0 subselect 1 superpc 1 paws.cost.management 15 SparseM 47 ggsignif 13 here 2 bench 1 bpcp 1 CBPS 1 Exact 1 MCMCglmm 1 MCMCpack 3 formatters 5 xaringanExtra 1 AgiMicroRna 0 dada2 0 illuminaio 1 limmaGUI 0 bigassertr 1 bigrquery 15 ipred 30 reshape 5 hexbin 18 findpython 12 bayesplot 13 MALDIquant 4 raster 23 sticky 0 gWidgets2tcltk 0 purr 0 Markdown 0 GMD 0 rj.gd 1 curatedMetagenomicData 0 AnVIL 0 beachmat 2 GENESIS 0 scran 2 dupRadar 0 SNPRelate 1 sva 1 proj4 19 brms 1 collections 1 dotCall64 10 lgr 2 padr 1 pkgcache 10 network 3 Runuran 1 shinySelect 0 riskRegression 2 esquisse 5 visNetwork 6 future.callr 5 fracdiff 5 quarto 10 keyring 6 servr 7 rvg 1 doRNG 5 units 51 npde 1 amgen.okta.client 1 qqconf 10 rhdf5filters 2 SNPlocs.Hsapiens.dbSNP155.GRCh38 610 randomcoloR 6 sparsesvd 20 docopt 6 Signac 14 perm 9 gsmoothr 6 R.devices 8 Rfast 18 isva 6 NADA 6 truncnorm 6 ggpointdensity 7 blme 7 mice 15 JADE 1 brew 70 Illumina450ProbeVariants.db 1 knitr 331 furrr 15 hms 80 scales 144 codetools 83 RColorBrewer 21 desc 134 formatR 52 tweenr 39 h2o 5 readr 130 lares 1 rpart.plot 1 RcppParallel 23 gplots 127 statmod 6 Rdpack 50 multcomp 102 remotes 154 sessioninfo 17 roxygen2 165 sfsmisc 4 tidyr 241 plotly 150 spatstat.geom 47 conquer 3 blob 80 FNN 139 assertive.properties 11 shinyjs 7 fansi 269 stringdist 23 circlize 52 msigdbr 6 openssl 427 htmlwidgets 213 agricolae 9 deSolve 17 campsismod 1 evd 4 epiR 3 forecast 10 lpSolveAPI 2 pdftools 9 precommit 1 pointblank 1 rclipboard 7 prismatic 6 rhub 3 profile 0 sensitivity 1 tracee 1 vaultr 1 phastCons35way.UCSC.mm39 15 RandomFields 1 RandomFieldsUtils 1 bit64 12 bit 58 BMA 1 xmlparsedata 1 loo 16 mlbench 13 r2d3 2 rcdk 11 plotmo 2 survMisc 2 yardstick 23 paws.storage 106 nloptr 45 sp 108 corpcor 3 Cubist 1 singleCellTK 0 cxAnalysis 0 phyloP35way.UCSC.mm39 14 Rcgmin 1 SuperLearner 1 asht 1 DOSE 3 clusterprofielr 0 clusterProfiler 4 qcNvs 0 SingleCellExperiment 12 Mfuzz 0 GlobalAncova 0 fgsea 2 polyester 0 GeneticsPed 0 highr 133 shape 62 npsurv 2 bigreadr 1 VGAM 17 ncdf4 13 tfruns 16 sjPlot 2 GLAD 0 rrBLUP 1 clusthaplo 0 bigmemory 2 biganalytics 0 bezier 1 forestplot 1 rngtools 3 N2R 1 tidyjson 0 EBImage 1 MAST 1 gsrc 0 ASExtras4 0 shinycssloaders 4 pkgconfig 3 BiocSingular 2 GSVA 1 IHW 1 goseq 0 ReportingTools 1 annaffy 1 MSnbase 1 AnnotationForge 1 wk 52 writexl 24 HiCBricks 0 imcRtools 0 BiasedUrn 14 doBy 4 NMdata 1 dtwclust 1 languageserver 2 memisc 1 pagedown 2 gridtext 3 PKNCA 1 pkgdepends 11 smoothHR 0 nonmemica 1 ucminf 5 huxtable 3 nlmixr2data 1 ks 9 rxode2et 1 polspline 4 timereg 1 timechange 169 vcr 1 mclogit 1 rngWELL 1 RobustRankAggreg 0 FactoMineR 26 HandTill2001 1 stringfish 11 rtkore 1 JASPAR2022 258 shinypanel 7 GWASExactHW 6 shinyFiles 14 reticulate 85 R.filesets 8 rsvd 11 shinyhelper 6 fds 6 GeomxTools 0 mutoss 9 ALL 11 WGCNA 14 xgboost 108 Rcpp 341 broom 115 openxlsx 52 R.cache 3 brave 1 rvest 154 paws.compute 65 gert 102 gmp 18 posterior 13 callr 237 caret 27 cluster 89 UCSCRepeatMasker 19 ps 310 minpack.lm 6 data.table 331 vctrs 288 sass 319 optparse 46 bdsmatrix 14 Rtsne 36 ica 4 rex 15 maps 15 spatstat.sparse 29 quantreg 85 ape 50 foreign 63 dbscan 7 farver 130 pdist 1 magrittr 26 dendextend 25 emayili 2 dockerfiler 1 drake 9 workflows 14 gld 1 ggdag 1 ggraph 33 insight 17 mlr3 3 palmerpenguins 1 qs 12 sf 45 sm 1 rticles 1 ISwR 1 ModelMetrics 2 prettyunits 193 BBmisc 1 flexmix 2 logistf 12 microbenchmark 1 segmented 29 pwr 1 randomForest 4 rstan 16 rstanarm 1 shinythemes 2 emdbook 12 paws 15 HDInterval 12 config 30 ddalpha 1 git2r 20 ivpack 0 km.ci 2 Ckmeans.1d.dp 0 NeuralNetTools 1 RcppTOML 19 Brobdingnag 1 Bioconductor 1 BSgenome.Hsapiens.UCSC.mm10 0 scater 1 decoupleR 1 Matching 3 Rhdf5lib 3 gcrma 1 affycoretools 1 derfinderHelper 0 tximport 1 expss 3 bigparallelr 1 brglm 1 libcoin 5 lsei 2 tsne 2 kernlab 19 adegenet 1 png 51 progressr 49 distributional 17 graphql 1 dae 1 ade4 5 httptest 4 shadowtext 33 BiocIO 2 pingr 13 pool 10 bumphunter 1 DropletUtils 2 widgetTools 1 Category 1 derfinder 0 CGHbase 1 genoset 0 minfi 1 LEA 1 rapportools 2 RClickhouse 1 ggstatsplot 3 phyclust 1 iml 1 dparser 1 ggRandomForests 0 mrgmisc 1 mapbayr 0 osqp 3 RefManageR 1 templater 1 flexclust 2 cubelyr 0 eha 1 mrgvalprep 1 gap 1 bigD 1 RcppDE 1 tidyvpc 1 RApiDatetime 1 slickR 0 survivalROC 1 nlmixr2est 1 modelenv 1 rms 4 AUCell 1 motifmatchr 2 pheatmap 1 FRASER 1 BSgenome.Cjacchus.UCSC.calJac4 36 BSgenome.CneoformansVarGrubiiKN99.NCBI.ASM221672v1 16 mixsqp 22 SNPlocs.Hsapiens.dbSNP155.GRCh37 897 processx 303 igraph 188 TSP 23 egg 6 NMF 14 reldist 9 filelock 83 aroma.core 9 RcppHNSW 33 pRolocdata 10 admisc 15 aws.s3 6 ash 6 SeuratObject 46 RcppZiggurat 7 iterators 10 RCurl 212 BSgenome.Gmax.NCBI.Gmv40 18 modelr 38 readxl 79 ggfun 67 tinytex 389 dtplyr 35 patchwork 78 httr 170 dplyr 258 ComplexHeatmap 15 e1071 61 fontawesome 113 ragg 230 nnet 55 ggplot2 383 testthat 312 commonmark 225 snow 18 digest 416 gargle 57 gaston 1 RcppEigen 182 fitdistrplus 25 lintr 101 fields 7 spatstat.core 14 DBI 323 cachem 264 locfit 108 babelgene 6 benchmarkme 1 magick 18 generics 30 renv 152 spatial 43 shiny 316 collapse 1 datawizard 13 clock 17 cobalt 2 duckdb 4 ymlthis 0 graphlayouts 58 nleqslv 2 lbfgs 1 RApiSerialize 9 projpred 1 ParamHelpers 1 saemix 1 rgl 4 tidyposterior 1 tidygraph 42 rstpm2 1 TMB 36 tune 16 RcppProgress 1 robustbase 36 DEoptimR 27 mclust 21 pamr 1 pander 5 party 57 pscl 3 styler 72 pryr 13 promises 260 fastmap 183 utf8 247 conflicted 14 dichromat 7 dimRed 1 C50 1 Lahman 1 RWiener 1 aldvmm 1 SingleCelLExperiment 0 minqa 122 org.mm.eg.db 0 DelayedArray 6 ndexr 0 crrri 0 globaltest 0 quantsmooth 1 mzR 1 ggbio 1 MassSpecWavelet 1 ShortRead 1 AnnotationFilter 1 ALDEx2 1 pcaMethods 1 ellipsis 15 gower 17 modeltools 1 StanHeaders 18 superheat 0 ggExtra 6 XVectorb 0 genefu 0 vegan 18 purrr 150 rj 1 datapipeline 1 lixoftConnectors.2 0 Matrix.utils 1 scam 1 phyloseq 1 mzID 0 GWASTools 0 DynDoc 1 DeconRNASeq 0 RNASeqPower 0 castor 2 Peptides 1 BSgenome.Hsapiens.UCSC.hg1 0 flowWorkspaceData 1 SBGNview.data 0 infercnv 1 bayestestR 9 gsDesign 1 fixest 1 JuliaCall 0 mlr 1 scatterplot3d 18 webfakes 1 ggbeeswarm 6 DEoptim 1 GPArotation 13 jpeg 18 juicyjuice 1 nanotime 1 rmutil 1 nlmixr2lib 1 gamlss 4 log4r 5 msm 6 NMcalc 1 XLConnect 1 dittoSeq 1 apcluster 1 nanostringr 1 multidplyr 0 inum 4 shinyBS 10 qlcMatrix 18 PRROC 6 GenABEL 2 R.huge 7 dqrng 65 shinydashboardPlus 15 venn 10 BSgenome.Btaurus.UCSC.bosTau9.masked 16 rainbow 11 metap 11 sctransform 22 zCompositions 11 BiocVersion 28 paws.common 110 sn 14 umap 14 xfun 442 DT 225 viridisLite 99 MafH5.gnomAD.v3.1.2.GRCh38 39 Formula 18 latticeExtra 13 viridis 214 isoband 54 crayon 156 lifecycle 225 cli 332 cpp11 208 glue 170 usethis 161 tzdb 67 qvalue 1 bbmle 14 future 200 leiden 28 systemfonts 303 lubridate 105 sandwich 14 goftest 2 deldir 58 VAM 1 class 52 colourpicker 11 credentials 51 rjson 22 pkgdown 105 textshaping 180 shinyjqui 1 yaml 246 Rhtslib 2 arm 4 cem 1 broom.helpers 11 clinPK 0 datamods 10 cmdstanr 1 Epi 3 flexdashboard 3 xaringan 1 nhanesA 0 plumber 20 RMariaDB 18 timeDate 41 spData 15 targets 11 systemfit 1 tarchetypes 9 tidymodels 16 RJSONIO 18 SDMTools 1 inline 1 AER 1 car 33 mda 1 exactRankTests 2 glmnet 26 trimcluster 0 paws.networking 15 paws.application.integration 15 DRR 1 maptools 22 lpSolve 16 whisker 48 geoR 1 splancs 10 glmnetUtils 11 gmodels 2 MatchIt 4 scPipe 0 GOSemSim 1 MatrixGenerics 3 pcaExplorer 0 apeglm 1 OrganismDbi 1 safetyexploreR 1 GenomicFiles 0 SPIA 0 RBGL 1 marray 1 weights 3 rapidjsonr 1 bigutilsr 1 profileModel 1 GetoptLong 4 seqminer 13 argparse 13 sys 125 qtl 1 RIdeogram 0 rsvg 3 ghql 0 officer 30 spatstat.random 45 seqinr 15 idr 0 VennDiagram 2 pkgmaker 2 sccore 1 ssh 1 GENIE3 0 siggenes 1 GOstats 1 hwriter 4 org.At.eg.db 0 cytolib 1 MCPcounter 0 variancePartition 1 gghighlight 1 chron 4 ggtext 4 matrixcalc 1 mets 2 vegawidget 1 seurat 1 foghorn 1 mapproj 2 rxode2parse 1 RcppGSL 5 rxode2ll 1 Rook 1 yaImpute 2 kohonen 1 scidb 1 biostatUtil 0 Rd2roxygen 0 qap 14 GenABEL.data 2 FlowSorted.Blood.EPIC 10 aroma.apd 9 shinyWidgets 120 aws.signature 6 fda 12 scrime 6 scattermore 19 rARPACK 6 ExomeDepth 1 clipr 22 gdata 22 googlesheets4 51 forcats 26 arrow 23 rmarkdown 370 nlme 235 lava 57 tfrmt 1 ggdendro 17 mime 30 crosstalk 138 XML 157 polyclip 99 vroom 166 httpuv 351 poppr 1 UniProtKeywords 42 MatrixModels 109 downlit 97 zoo 36 pbapply 40 mnormt 18 xml2 186 tibble 85 tidyselect 217 dbplyr 231 lattice 209 matrixStats 224 irlba 22 shinytest 2 tidyverse 23 estimability 28 bbr 1 binr 0 dfidx 1 cubature 2 dm 1 doMC 2 workflowsets 15 ggdist 7 ggeffects 4 lavaan 24 gtsummary 3 lambdr 1 lotri 1 metafor 6 performance 12 plm 1 parameters 12 partykit 4 spacetime 2 urca 7 scico 1 KernSmooth 82 mixtools 2 strucchange 1 rcdklibs 12 slider 18 threejs 1 spls 1 earth 3 epitools 1 rly 0 paws.customer.engagement 15 paws.machine.learning 15 pbmcapply 1 lhs 14 pbkrtest 53 labeling 180 DBItest 1 OncoBayes2 1 RSNNS 0 AsioHeaders 6 GEOquery 1 DelayedMatrixStats 14 metagenomeSeq 1 maSigPro 0 BiocNeighbors 3 GSEABase 1 lpsymphony 1 coda 23 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