09e0a42fc8dca56a0381ffb6bf4829f4 *DESCRIPTION
a444fd1d122abc960652d6489470ff8a *NAMESPACE
9f62feaf6ef7afd4f7b582a55062ba0a *R/data.R
68cf6ca2f778142690dfc63834737997 *R/helper_CCI.R
bd6031726b4144e13ca91554d3c77170 *R/helper_bulk_expression.R
6f083483481434e6fc5b61c5ddc391a8 *R/helper_celltype_expression.R
9d89c0eec7344fa912a336f8cb30106a *R/helper_pathway.R
acede7c8169e7cbc8d9c0db4a4ee6e0a *R/helper_proportion.R
2242bc4d6b2d5f6e3e96ccdb4ffb23d5 *R/helper_spatial_metrics.R
62be82d0303757bcd8ffead1aa027956 *R/run_scfeatures.R
b57963275fd6553d072b48e5126209e4 *R/utils.R
773a9e3162656d714038ecd3953863fd *R/wrapper_run_scfeatures.R
4d0971933b02d51faa01bba57bd0703e *README.md
35bbd202bc9ae2f36b246048ad35fac1 *_pkgdown.yml
cd37cd792fdb85d22d6d282d85920c69 *build/vignette.rds
9447d1a9fa9001aff84c52282d2fd0d2 *data/datalist
d0c032cf7ffcea74a665ecfcd03c07cb *data/example_scrnaseq.RData
c239253c5dd23cb3c03fdb089eaf2b6a *data/scfeatures_result.RData
ce7a3692d542b3ad18fa1d3768f45afe *inst/CITATION
804da453bf2295ac6afae8d9a1026391 *inst/doc/scFeatures_overview.R
394411b45c6d244cd07595b409211eb9 *inst/doc/scFeatures_overview.Rmd
c0caac2c5585e48d6eb8c34275ef19d2 *inst/doc/scFeatures_overview.html
de5f9524d694bdf4f2841c4000024d52 *inst/extdata/figure/CCI_example_figures.png
3584fd05adfb99dd0f5f4edb9303e4f2 *inst/extdata/figure/aggregatedgene_example_figures.png
dc00355b87c3315bbab8ac6a43d9eb56 *inst/extdata/figure/celltypegene_example_figures.png
e2344b1c7054ef46506b55c3fa0d153c *inst/extdata/figure/celltypeproportion_example_figures.png
28f37128491c2ef83ef9b7a46133f12e *inst/extdata/figure/pathway_example_figures.png
533123c23ec7427bd324bd76afebc81d *inst/extdata/figure/spatial_example_figures.png
9e5b6f80a7acf3363378b8418a04474a *inst/extdata/output_report.Rmd
706d9bba8595765e5c389808094913e1 *inst/overview.png
e41bfe31640e94541d7ef79a39e89013 *inst/script/example_scrnaseq
7240dac8836e40aa078b802afe4f2484 *inst/sticker.png
bb1fd7ee03ee23a0bd8c9538e9430be6 *man/example_scrnaseq.Rd
db707108bffa40ba1598fb739c339096 *man/get_num_cell_per_spot.Rd
cc6c465ed95376c92ba4f7f9f5850429 *man/remove_mito_ribo.Rd
3e120f0ad6a3a17558a94b252e2a4f65 *man/run_CCI.Rd
aa7d9de504d7a7408bd379b808e7005c *man/run_L_function.Rd
5ecfc6c0b070673b34b29072d0fbed49 *man/run_Morans_I.Rd
cab32c6efc9bc8d755c74207b1fa871b *man/run_association_study_report.Rd
6ead5927f646d4a26f6f8469b863f36b *man/run_celltype_interaction.Rd
aa82f30082a079c91aebdee0c8b4ba5f *man/run_gene_cor.Rd
4c25f830597ff5fc875c4caad883f7b3 *man/run_gene_cor_celltype.Rd
e47f610166c79289d31d6649d8ed9f11 *man/run_gene_mean.Rd
b8a1ed1f8c16e9bb619a1d65826da07f *man/run_gene_mean_celltype.Rd
0ebd4c62f96152bef9f7332da84ba013 *man/run_gene_prop.Rd
29b5ac34ee136765e0220062d2cac828 *man/run_gene_prop_celltype.Rd
9547aa0efe8ced2edc574aced4664cd6 *man/run_nn_correlation.Rd
9e63846f73a907dda630583a68c503be *man/run_pathway_gsva.Rd
2064272b46465c120d76df73a2ed3325 *man/run_pathway_mean.Rd
136060a6cd2b2022097dba22981f0d25 *man/run_pathway_prop.Rd
361d2c52bda214ed82efdabbe48d6c37 *man/run_proportion_logit.Rd
f9d3854f17cc9a32ca880c430ff0b7f6 *man/run_proportion_ratio.Rd
9db70b54307792b770fd79410d926b68 *man/run_proportion_raw.Rd
a1bbcdaa5a0caef4f1087197188ba7a2 *man/scFeatures.Rd
0ef17e63abb40ec832311abace784b3e *man/scfeatures_result.Rd
394411b45c6d244cd07595b409211eb9 *vignettes/scFeatures_overview.Rmd
