VERSION 1.2.0 ------------- SIGNIFICANT USER-VISIBLE CHANGES o Adjust makeTxDbFromBiomart() examples to reflect breaking change in Ensembl 113. See commit a5a885d for the details. BUG FIXES o Small fix to internal helper .Ensembl_getMySQLCoreDir(). See commit aa586a6 for the details. VERSION 1.0.0 ------------- o The txdbmaker package is a spin-off from the GenomicFeatures package. It includes the following functions, all of them originally from the GenomicFeatures package: - browseUCSCtrack - getChromInfoFromBiomart - makeFDbPackageFromUCSC - makeFeatureDbFromUCSC - makePackageName - makeTxDb - makeTxDbFromBiomart - makeTxDbFromEnsembl - makeTxDbFromGFF - makeTxDbFromGRanges - makeTxDbFromUCSC - makeTxDbPackage - makeTxDbPackageFromBiomart - makeTxDbPackageFromUCSC - supportedMiRBaseBuildValues - supportedUCSCFeatureDbTables - supportedUCSCFeatureDbTracks - supportedUCSCtables - UCSCFeatureDbTableSchema