Sadiq, H. et al (2024), "scoup: Simulate Codon Sequences with Darwinian Selection Incorporated as an Ornstein-Uhlenbeck Process", Journal Name Vol(No.): ppA–ppZ. This file documents package changes since first submission on Bioconductor. 0.99.16 - 0.99.17 (2024-10-23): Developmental Release Changes + Edited citation and vignette appropriately 0.99.15 (2024-10-09): Review Changes + Incorporated recommendations from @jianhong + Updated 'biTree' to include test and warning 0.99.2 - 0.99.12 (2024-08-14): Additional Pre-Review Changes + Updated temporary inst/CITATION file. + Updated seqDetails.R to accommodate NOTE from Bioc report about use of "is". + Updated NAMESPACE as recommended by Bioc report: imported "methods" & "is". + Incorporated Biostrings: used to generate colorful sequences. + Initiated unit tests. 0.99.1 (2024-08-13): Pre-Review Changes + Updated temporary inst/CITATION file. + Deleted redundant LICENSE file. + Removed patchlevel dependency attached to R in DESCRIPTION file. + Shortened code lengths and corrected T/F. + Adjusted spaces to size 4. + Bumped package version number to *.**.1. 0.99.0 (2024-08-01): First Submitted Version + Submitted on Bioconductor for review. + Edited the DESCRIPTION, README and vignettes with Bioconductor-esque installation instructions.