mirIntegrator
This is the development version of mirIntegrator; for the stable release version, see mirIntegrator.
Integrating microRNA expression into signaling pathways for pathway analysis
Bioconductor version: Development (3.21)
Tools for augmenting signaling pathways to perform pathway analysis of microRNA and mRNA expression levels.
Author: Diana Diaz <dmd at wayne dot edu>
Maintainer: Diana Diaz <dmd at wayne.edu>
Citation (from within R, enter
citation("mirIntegrator")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("mirIntegrator")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("mirIntegrator")| mirIntegrator Overview | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | GraphAndNetwork, KEGG, Microarray, Network, Pathways, Software |
| Version | 1.37.0 |
| In Bioconductor since | BioC 3.2 (R-3.2) (9 years) |
| License | GPL (>=3) |
| Depends | R (>= 3.3) |
| Imports | graph, ROntoTools, ggplot2, org.Hs.eg.db, AnnotationDbi, Rgraphviz |
| System Requirements | |
| URL | http://datad.github.io/mirIntegrator/ |
See More
| Suggests | RUnit, BiocGenerics |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | mirIntegrator_1.37.0.tar.gz |
| Windows Binary (x86_64) | mirIntegrator_1.37.0.zip (64-bit only) |
| macOS Binary (x86_64) | mirIntegrator_1.37.0.tgz |
| macOS Binary (arm64) | mirIntegrator_1.37.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/mirIntegrator |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/mirIntegrator |
| Bioc Package Browser | https://code.bioconductor.org/browse/mirIntegrator/ |
| Package Short Url | https://bioconductor.org/packages/mirIntegrator/ |
| Package Downloads Report | Download Stats |