brendaDb
This is the development version of brendaDb; for the stable release version, see brendaDb.
The BRENDA Enzyme Database
Bioconductor version: Development (3.21)
R interface for importing and analyzing enzyme information from the BRENDA database.
Author: Yi Zhou [aut, cre] (ORCID:
Maintainer: Yi Zhou <yi.zhou at uga.edu>
Citation (from within R, enter
citation("brendaDb")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("brendaDb")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("brendaDb")| brendaDb | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | Annotation, DataImport, Software, ThirdPartyClient |
| Version | 1.21.0 |
| In Bioconductor since | BioC 3.10 (R-3.6) (5 years) |
| License | MIT + file LICENSE |
| Depends | |
| Imports | dplyr, Rcpp, tibble, stringr, magrittr, purrr, BiocParallel, crayon, utils, tidyr, grDevices, rlang, BiocFileCache, rappdirs |
| System Requirements | C++11 |
| URL | https://github.com/y1zhou/brendaDb |
| Bug Reports | https://github.com/y1zhou/brendaDb/issues |
See More
| Suggests | testthat, BiocStyle, knitr, rmarkdown, devtools |
| Linking To | Rcpp |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | brendaDb_1.21.0.tar.gz |
| Windows Binary (x86_64) | brendaDb_1.21.0.zip |
| macOS Binary (x86_64) | brendaDb_1.21.0.tgz |
| macOS Binary (arm64) | brendaDb_1.21.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/brendaDb |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/brendaDb |
| Bioc Package Browser | https://code.bioconductor.org/browse/brendaDb/ |
| Package Short Url | https://bioconductor.org/packages/brendaDb/ |
| Package Downloads Report | Download Stats |