biodbNci
This is the development version of biodbNci; for the stable release version, see biodbNci.
biodbNci, a library for connecting to biodbNci, a library for connecting to the National Cancer Institute (USA) CACTUS Database
Bioconductor version: Development (3.21)
The biodbNci library is an extension of the biodb framework package. It provides access to biodbNci, a library for connecting to the National Cancer Institute (USA) CACTUS Database. It allows to retrieve entries by their accession number, and run specific web services.
Author: Pierrick Roger [aut, cre] (ORCID:
Maintainer: Pierrick Roger <pierrick.roger at cea.fr>
citation("biodbNci")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("biodbNci")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("biodbNci")| Introduction to the biodbNci package. | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | DataImport, Infrastructure, Software |
| Version | 1.11.0 |
| In Bioconductor since | BioC 3.15 (R-4.2) (2.5 years) |
| License | AGPL-3 |
| Depends | R (>= 4.1) |
| Imports | biodb(>= 1.3.1), R6, Rcpp, chk |
| System Requirements | |
| URL |
See More
| Suggests | roxygen2, BiocStyle, testthat (>= 2.0.0), devtools, knitr, rmarkdown, covr, lgr |
| Linking To | Rcpp, testthat |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | biodbNci_1.11.0.tar.gz |
| Windows Binary (x86_64) | biodbNci_1.11.0.zip (64-bit only) |
| macOS Binary (x86_64) | biodbNci_1.11.0.tgz |
| macOS Binary (arm64) | biodbNci_1.11.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/biodbNci |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/biodbNci |
| Bioc Package Browser | https://code.bioconductor.org/browse/biodbNci/ |
| Package Short Url | https://bioconductor.org/packages/biodbNci/ |
| Package Downloads Report | Download Stats |