ExperimentHub
This is the development version of ExperimentHub; for the stable release version, see ExperimentHub.
Client to access ExperimentHub resources
Bioconductor version: Development (3.21)
This package provides a client for the Bioconductor ExperimentHub web resource. ExperimentHub provides a central location where curated data from experiments, publications or training courses can be accessed. Each resource has associated metadata, tags and date of modification. The client creates and manages a local cache of files retrieved enabling quick and reproducible access.
Author: Bioconductor Package Maintainer [cre], Martin Morgan [aut], Marc Carlson [ctb], Dan Tenenbaum [ctb], Sonali Arora [ctb], Valerie Oberchain [ctb], Kayla Morrell [ctb], Lori Shepherd [aut]
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
citation("ExperimentHub")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("ExperimentHub")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ExperimentHub")| ExperimentHub: Access the ExperimentHub Web Service | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | DataImport, GUI, Infrastructure, Software, ThirdPartyClient |
| Version | 2.15.0 |
| In Bioconductor since | BioC 3.4 (R-3.3) (8 years) |
| License | Artistic-2.0 |
| Depends | methods, BiocGenerics(>= 0.15.10), AnnotationHub(>= 3.3.6), BiocFileCache(>= 1.5.1) |
| Imports | utils, S4Vectors, BiocManager, rappdirs |
| System Requirements | |
| URL | |
| Bug Reports | https://github.com/Bioconductor/ExperimentHub/issues |
See More
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | ExperimentHub_2.15.0.tar.gz |
| Windows Binary (x86_64) | ExperimentHub_2.15.0.zip |
| macOS Binary (x86_64) | ExperimentHub_2.15.0.tgz |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/ExperimentHub |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ExperimentHub |
| Bioc Package Browser | https://code.bioconductor.org/browse/ExperimentHub/ |
| Package Short Url | https://bioconductor.org/packages/ExperimentHub/ |
| Package Downloads Report | Download Stats |