| SCArray.sat-package | Large-scale single-cell RNA-seq data analysis using GDS files and Seurat | 
| CreateAssayObject2 | Create an Assay object | 
| GetAssayData | SCArrayAssay S3 methods | 
| GetAssayData.SCArrayAssay | SCArrayAssay S3 methods | 
| NormalizeData | Normalize Count Data | 
| NormalizeData.SC_GDSMatrix | Normalize Count Data | 
| RunPCA | Run PCA | 
| RunPCA.SCArrayAssay | Run PCA | 
| RunPCA.SC_GDSMatrix | Run PCA | 
| ScaleData | Scale and Center the Data | 
| ScaleData.SC_GDSMatrix | Scale and Center the Data | 
| SCArray.sat | Large-scale single-cell RNA-seq data analysis using GDS files and Seurat | 
| SCArrayAssay | GDS-specific Assay Class | 
| SCArrayAssay-class | GDS-specific Assay Class | 
| SCArrayAssay-methods | SCArrayAssay S3 methods | 
| scGetFiles | File names for on-disk backend | 
| scGetFiles-method | File names for on-disk backend | 
| scMemory | Load Data to Memory | 
| scMemory-method | Load Data to Memory | 
| scNewAssayGDS | Create Assay Object | 
| scNewSeuratGDS | Create Seurat Object | 
| SetAssayData | SCArrayAssay S3 methods | 
| SetAssayData.SCArrayAssay | SCArrayAssay S3 methods | 
| Seurat_g | GDS-based Seurat Class | 
| Seurat_g-class | GDS-based Seurat Class | 
| subset | SCArrayAssay S3 methods | 
| subset.SCArrayAssay | SCArrayAssay S3 methods |