plasFIA

This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see plasFIA.

FIA-HRMS plasma dataset

Bioconductor version: 3.9

Positive Ionization FIA-HRMS data of human plasma spiked with a pool of 40 compounds acquired in FIA-HRMS mode on an orbitrap fusion. plasFIA also include the result of the processing by the proFIA package with adapted parameters for an Orbitrap Fusion.

Author: Alexis Delabriere, Etienne Thevenot, Ulli Hohenester and Christophe Junot.

Maintainer: Alexis Delabriere <alexis.delabriere at outlook.fr>

Citation (from within R, enter citation("plasFIA")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("plasFIA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation


Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	ExperimentData, MassSpectrometryData
Version	1.12.0
License	LGPL
Depends	proFIA
Imports
System Requirements
URL

Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me	proFIA
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	plasFIA_1.12.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/plasFIA
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/plasFIA
Package Short Url	https://bioconductor.org/packages/plasFIA/
Package Downloads Report	Download Stats