mitoODEdata
This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see mitoODEdata.
Experimental data associated to the paper "Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay" (submitted).
Bioconductor version: 3.9
This package contains the experimental data (assay annotation, siRNA annotation, time-lapse cell counts) associated to the paper "Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay" (submitted). The data ultimately come from the Mitocheck assay reported in "Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes" (Neumann, Walter et al, Nature 2010).
Author: Gregoire Pau
Maintainer: Gregoire Pau <pau.gregoire at gene.com>
citation("mitoODEdata")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("mitoODEdata")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("mitoODEdata")| Mitoode data | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | ExperimentData, Genome |
| Version | 1.20.0 |
| License | LGPL |
| Depends | R (>= 2.14.0) |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | mitoODE |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | mitoODEdata_1.20.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/mitoODEdata |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/mitoODEdata |
| Package Short Url | https://bioconductor.org/packages/mitoODEdata/ |
| Package Downloads Report | Download Stats |