LungCancerACvsSCCGEO
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see LungCancerACvsSCCGEO.
A lung cancer dataset that can be used with maPredictDSC package for developing outcome prediction models from Affymetrix CEL files.
Bioconductor version: 3.9
This package contains 30 Affymetrix CEL files for 7 Adenocarcinoma (AC) and 8 Squamous cell carcinoma (SCC) lung cancer samples taken at random from 3 GEO datasets (GSE10245, GSE18842 and GSE2109) and other 15 samples from a dataset produced by the organizers of the IMPROVER Diagnostic Signature Challenge available from GEO (GSE43580).
Author: Adi Laurentiu Tarca <atarca at med.wayne.edu>
Maintainer: Adi Laurentiu Tarca <atarca at med.wayne.edu>
citation("LungCancerACvsSCCGEO")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("LungCancerACvsSCCGEO")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | CancerData, ExperimentData, GEO, LungCancerData, MicroarrayData |
| Version | 1.20.0 |
| License | GPL-2 |
| Depends | R (>= 2.15.0) |
| Imports | |
| System Requirements | |
| URL | http://bioinformaticsprb.med.wayne.edu/ |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | maPredictDSC |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | LungCancerACvsSCCGEO_1.20.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/LungCancerACvsSCCGEO |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/LungCancerACvsSCCGEO |
| Package Short Url | https://bioconductor.org/packages/LungCancerACvsSCCGEO/ |
| Package Downloads Report | Download Stats |