caOmicsV
This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see caOmicsV.
Visualization of multi-dimentional cancer genomics data
Bioconductor version: 3.9
caOmicsV package provides methods to visualize multi-dimentional cancer genomics data including of patient information, gene expressions, DNA methylations, DNA copy number variations, and SNP/mutations in matrix layout or network layout.
Author: Henry Zhang
Maintainer: Henry Zhang <hzhang at mail.nih.gov>
citation("caOmicsV")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("caOmicsV")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("caOmicsV")| Intrudoction_to_caOmicsV | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | ImmunoOncology, Network, RNASeq, Software, Visualization |
| Version | 1.14.0 |
| In Bioconductor since | BioC 3.2 (R-3.2) (8.5 years) |
| License | GPL (>=2.0) |
| Depends | R (>= 3.2), igraph (>= 0.7.1), bc3net (>= 1.0.2) |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | caOmicsV_1.14.0.tar.gz |
| Windows Binary | caOmicsV_1.14.0.zip |
| Mac OS X 10.11 (El Capitan) | caOmicsV_1.14.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/caOmicsV |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/caOmicsV |
| Bioc Package Browser | https://code.bioconductor.org/browse/caOmicsV/ |
| Package Short Url | https://bioconductor.org/packages/caOmicsV/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |