OLIN
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see OLIN.
Optimized local intensity-dependent normalisation of two-color microarrays
Bioconductor version: 3.9
Functions for normalisation of two-color microarrays by optimised local regression and for detection of artefacts in microarray data
Author: Matthias Futschik <mfutschik at ualg.pt>
Maintainer: Matthias Futschik <mfutschik at ualg.pt>
Citation (from within R, enter
citation("OLIN")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("OLIN")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("OLIN")| Introduction to OLIN | R Script | |
| Reference Manual |
Details
| biocViews | Microarray, Preprocessing, QualityControl, Software, TwoChannel, Visualization |
| Version | 1.62.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 19 years) |
| License | GPL-2 |
| Depends | R (>= 2.10), methods, locfit, marray |
| Imports | graphics, grDevices, limma, marray, methods, stats |
| System Requirements | |
| URL | http://olin.sysbiolab.eu |
See More
| Suggests | convert |
| Linking To | |
| Enhances | |
| Depends On Me | OLINgui |
| Imports Me | OLINgui |
| Suggests Me | maigesPack |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | OLIN_1.62.0.tar.gz |
| Windows Binary | OLIN_1.62.0.zip |
| Mac OS X 10.11 (El Capitan) | OLIN_1.62.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/OLIN |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/OLIN |
| Bioc Package Browser | https://code.bioconductor.org/browse/OLIN/ |
| Package Short Url | https://bioconductor.org/packages/OLIN/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |